Pairwise Alignments

Query, 584 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 628 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  150 bits (380), Expect = 1e-40
 Identities = 104/368 (28%), Positives = 159/368 (43%), Gaps = 31/368 (8%)

Query: 16  ICFGSCKKDFLDKLPITDIAPQTFFKNEKDLELYCNGLYSLVPGAGIMT-DDTQSDNMET 74
           I F SC   F+++ P T +  QT F N    + Y  GLY +     I+    T       
Sbjct: 7   IGFTSCNDSFMERYPDTSLTEQTVFSNYNTFKTYAWGLYGVFTNTNILRIPGTNGAYASA 66

Query: 75  LPYDKVVAGEYLV----------------PSTGGGWSWSYLRSVNYFLENYGKANAAAEA 118
             Y   +   YL+                 S+G GW++S++  VN  L N   +      
Sbjct: 67  TSYTSDIYAGYLMRRQGDGNPYAFQNVSSSSSGNGWAFSFVYRVNVMLANIDNSGMTDAD 126

Query: 119 KNHYVGVARLFRAWFYFDKVKRFGNVPWYSGTMNINDEAQLYKPQDPRTLVMDSVLKDLD 178
           K H+  V   FRA++Y + + RFG+VPW    +  +D+   Y P+ PR  V D VL DL 
Sbjct: 127 KEHWRSVGYFFRAYYYSELIARFGDVPWVDRVLGDSDKEIAYGPRTPRKEVADHVLNDLI 186

Query: 179 YASANIRTSKTPLWTINRYVALSLKSRICLFEGTWRKYRGIADADRFLIAAKDAAKKVID 238
           YA  +I+       TIN +V  +L SR CLFEGTWRKY  + D D++  A    +KK++D
Sbjct: 187 YAEEHIKEEGDGENTINVHVVRALLSRFCLFEGTWRKYHALGDEDKYFDACITYSKKLMD 246

Query: 239 EGGYSLYTTGKPDVDYLNLFAMSDAPQNEVILAYEY--STILNLRHAFSAESGAYGRGFT 296
                  +  + + D+  +          +IL  EY    + N        +  +     
Sbjct: 247 -------SYPELNSDWGEMLTSDLKGMKGIILYKEYVEKELTNYVLTHVERTSTHNVEMP 299

Query: 297 KEMVNSYLMKDGTPFTSVAGYATKTYMDE-----FENRDPRLIQTVLNPLYTRTDRTDAS 351
           + +++ YL KDG    + + Y      D      F NRD RL++TV  P        + S
Sbjct: 300 QHIIDMYLCKDGKTIHNSSEYEWSQDGDNSMNATFRNRDLRLLETVAPPYKVIPSADNTS 359

Query: 352 KRFSPIPK 359
             ++  PK
Sbjct: 360 WEYTSDPK 367



 Score = 84.0 bits (206), Expect = 2e-20
 Identities = 72/215 (33%), Positives = 94/215 (43%), Gaps = 31/215 (14%)

Query: 377 DPIKEIYGQSDNDAPVIRYAEVLLNYAEAMAELGT-----ITQADLDLTINKLRDRVGMT 431
           D  KE  G SD   P+ +  EV+LNYAEA  E G        Q   DLTINKLRDRVG+ 
Sbjct: 438 DNSKENEGTSD--VPLFKIDEVMLNYAEAKFEKGGTGAEGFNQTVADLTINKLRDRVGVA 495

Query: 432 GAAHLNMGVAIDPVLAAQYPDVSSALILEIRRERRVELAGEGFRYSDILRWKAGNLLAKK 491
                 +    DP    +       ++ EIRRER VEL GEGF + D+ RWK       K
Sbjct: 496 HMKVAEINAGFDP----KRDQTVDPVLWEIRRERMVELMGEGFGFYDVRRWKKAPWFINK 551

Query: 492 FYGIYFPGLGEYDLTKDGK-LDFAIVAAIPAVKTPGVTYAVINKDIYLSNGNSGNIVPYP 550
               Y     +  +   G+ +D     A    K  G  Y + N  +    G         
Sbjct: 552 IQ--YGQWATKEQIGDSGQFVDLEKGYADTTGKKEGFIY-MYNDPLVAGKGWL------- 601

Query: 551 NQTKTFNENKNYLFPIPTSELLLNKNLI-QNPGWQ 584
                   +K YL+ +PT+E+ LN  L   NPGW+
Sbjct: 602 --------DKYYLYQVPTNEIALNPELAPNNPGWE 628