Pairwise Alignments

Query, 584 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 666 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  130 bits (328), Expect = 1e-34
 Identities = 167/678 (24%), Positives = 268/678 (39%), Gaps = 129/678 (19%)

Query: 9   LSIVIILICFGSCKKDFLDKLPITDIAPQTFFKNEKDLELYCNGLYSLVP-----GAGIM 63
           +S ++  + F +   DFL++ P+  ++P  +   E ++  +    Y ++P     G G  
Sbjct: 6   ISTLLSGVLFLTSCNDFLNQEPLDQLSPNEYLTTESNIAAFATDQYQVLPTHGTYGYGTF 65

Query: 64  TDDTQSDNMETLPYDKVVA-GEYLVPSTGGGWSWSYLRSVNYFLEN----YGKANAAAEA 118
             D  +DNM  +  + + A G + V   GG W ++ +   NYF EN    Y         
Sbjct: 66  EIDNNTDNMAGMQPNVMYAPGYWKVGQEGGSWYFADIYRCNYFFENVLPSYENNAIVGNT 125

Query: 119 KN--HYVGVARLFRAWFYFDKVKRFGNVPWYSGTMNINDEAQL-YKPQDPRTLVMDSVLK 175
            N  HY+G    FRA+ YF+++K  G+ P  + T     EA +    + PR  V   +L 
Sbjct: 126 TNIKHYIGEMYFFRAFMYFERLKSLGDFPIITKTYPNEREALIEISKRAPRNEVARFILS 185

Query: 176 DLDYASANIRTSKTPLWTINRY---VALSLKSRICLFEGTWRK-YRGIA----------- 220
           DLD A   +  +  P    NR     A+ LKSR+ L+EG+W K ++G A           
Sbjct: 186 DLDKA-IEMMQNIAPSGGKNRLSKDCAILLKSRVALYEGSWLKNFKGTAFVPNGPGWPGA 244

Query: 221 -----------------DADRFLIAAKDAAKKVIDE-------GGYSLYTTGKPDVDYLN 256
                            +++ F   A  AA+ + ++        G    T+ +P+  Y +
Sbjct: 245 NKDYNANYSFKSGSIEKESEFFFDEAIKAAQIIAEKYNILTANTGVFPQTSSEPENPYFS 304

Query: 257 LFAMSDAPQ-NEVILAYEYSTILNLRHAFSAES--GAYGRGFTKEMVNSYLMKDGTPFTS 313
           +F   D  + NEV+L   Y+T L + +        G  G G TK M++++++K+G P   
Sbjct: 305 MFCDIDMEKYNEVLLWRRYNTGLGVANEVCQYGCVGNNGVGTTKSMIDAFILKNGEPI-- 362

Query: 314 VAGYATKTYMDE-------------FENRDPRLIQTVLNP----LYTRTDRTDASKRFSP 356
              YA+  + DE              +NRD R    +  P    L+T+       + + P
Sbjct: 363 ---YASPMWADENSSYWGDNNIIHITKNRDTRADIFIKKPGQKNLHTQAGDHGVVEEWGP 419

Query: 357 ---IPKIPGGTPTGYLQVKFYQDDPIKEIYGQSDNDAPVIRYAEVLLNYAEAMAEL-GTI 412
                 +     TGY   K    D       QS   + + R AE  LNY EA  EL G++
Sbjct: 420 NITASSVTEKYNTGYALRKGLNPDGKYTNNTQSIVGSIIFRTAEAYLNYIEAYYELHGSL 479

Query: 413 ------------TQADLDLTINKLRDRVGMTGAAHLNMGVAIDPVLAAQYPDVSSALILE 460
                        +A +D    K      M+  A  + G       A    ++  A    
Sbjct: 480 DSYAEKYWKAIRRRAGIDEDYTKTIRLTDMSKEAETDWG-------AYSGGEIIDATRYN 532

Query: 461 IRRERRVELAGEGFRYSDILRWKAGNLLAKKFYGIYFPGLGE----YDLTKDGKLDFAIV 516
           IRRERR EL  EG R  D+ RW++ + +  K Y I    L +    +D  KD   +  + 
Sbjct: 533 IRRERRCELMAEGLRSMDLHRWRSMDQMITKPYHILGMNLWQEMYGWDWYKDSNGNSILK 592

Query: 517 AAIPAVKTPGVTYAV---INKDIYLSNGNSGNIVPYPNQTKTFNENKNYLFPIPTSELLL 573
                      TY     I  +  + NG   N+              +YL PI     L+
Sbjct: 593 EGENVSPRSFSTYLAPYHITANNIVYNGYKWNMA-------------HYLDPIAAEHFLV 639

Query: 574 NKN--------LIQNPGW 583
             +        + QNPGW
Sbjct: 640 TSSGGDLDSSPIYQNPGW 657