Pairwise Alignments

Query, 584 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 591 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  208 bits (530), Expect = 4e-58
 Identities = 199/619 (32%), Positives = 286/619 (46%), Gaps = 86/619 (13%)

Query: 20  SCKKDFLDKLPITDIAPQTFFKNEKDLELYCNGLYSLVPG-----AGIMTDDTQSDNMET 74
           S   DFLD+ P+T    +TF  N   +  Y NGLY  +P       G+  ++  SDN+  
Sbjct: 3   SACSDFLDREPLTTPNSETFLSNASAVNNYINGLYIALPSFGTYDMGVRGEEKNSDNIVA 62

Query: 75  LPYDKVVAGEYLVPSTGGG---WSWSY--LRSVNYFLENYGKANAAAEAKN--HYVGVAR 127
             YDK + GE  +   GGG   W   Y  LR+VNYF E Y K     E K+     G A 
Sbjct: 63  EVYDKRLNGE--LQENGGGTTEWQKGYQNLRNVNYFFEYY-KVPETEETKDVLSMKGEAY 119

Query: 128 LFRAWFYFDKVKRFGNVP----WYSGTMNINDEAQLYKPQDPRTLVMDSVLKDLDYASAN 183
            FRA+++F  + RFG++P    ++ G   +     L  P   R+ V   +L DL+ A   
Sbjct: 120 FFRAYWHFYLLTRFGSIPVMDRFWDGNATVGG---LQIPPRDRSAVAQFILDDLNTAKGL 176

Query: 184 IRT-SKTPLWTINRYVALSLKSRICLFEGTWRKYRGIADADRFLIAAKDAAKKVIDEG-- 240
           + + S+     + +  A+ +  R+ L+EGTW KY    D       + D   +V+  G  
Sbjct: 177 LHSRSQYKGLRVCKEAAIIMAMRVALYEGTWEKYHKGTDFAAAEDKSADLLGQVLTLGDE 236

Query: 241 ----GYSLYT--TGKPDVD----YLNLFAMSD-APQNEVILAYEYSTILNLRHAFSAESG 289
               G +L T  T K  V+    Y ++F   D +   EV+   +YS    + H  S+  G
Sbjct: 237 LFGMGLALNTKATDKNAVNIEDAYAHIFNSKDLSDMTEVVFWKKYSIADGVIHNLSSNLG 296

Query: 290 AY------GRGFTKEMVNSYLMKDGTPFTSVAGYATKTYMDEFENRDPRLIQTVL--NPL 341
           A         G ++ +V++YL  DGTP     G   K +   F+ RD RL+ TV+  N  
Sbjct: 297 AGYVDNSGPAGLSQSLVDNYLNADGTPINPADGIF-KDFNLTFKGRDGRLLATVMHSNCK 355

Query: 342 YTRT------------DRTDASKRFSPIPKIPGGTP----TGYLQVKFYQDDPIKEIYGQ 385
           +  T            + ++ +K+    P +  G P    TGY  ++   D     + GQ
Sbjct: 356 FKSTSPESKSKAMLVEEYSEENKQIVRPPYLTEGGPARNATGY-HIRMSIDTTY--VSGQ 412

Query: 386 SDNDAPVIRYAEVLLNYAEAMAELGTITQADLDLTINKLRDRVGMTGAAHLNMGVAIDPV 445
            +   PVIRYAE LL YAEA  ELG  T A L+ T+  LR+R G+T          IDP 
Sbjct: 413 GETSLPVIRYAEALLAYAEAAEELGKCTPAVLEKTLKPLRERAGVT----YKDPSEIDPN 468

Query: 446 LAAQYPDVSSALILEIRRERRVELAGEGFRYSDILRWKAGNLLAKKFYGIYFPGLGEYDL 505
               +    SA + EIRRERR ELA +GFR  D++RW+A  L+  K       G G Y  
Sbjct: 469 FT-DFGYTISANLQEIRRERRAELALQGFRLDDLMRWRAHKLIQGK------RGTGAYFG 521

Query: 506 TKDGKLDFAIVAAIPAVKTPGVTYAVINKDIYLSNGNSGNIVPYPNQTKTFNENKNYLFP 565
           T DG L  A        K       ++  D +L       ++P   Q   F+ N++YL P
Sbjct: 522 T-DGVLYKAFDP-----KNAADLKTILTTDGWLDPQKE--LLPRGYQ---FDANRDYLLP 570

Query: 566 IPTSELLLNKNLIQNPGWQ 584
           +P SE+ LN  L QNPGWQ
Sbjct: 571 VPPSEISLNHELKQNPGWQ 589