Pairwise Alignments

Query, 584 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 618 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  219 bits (558), Expect = 3e-61
 Identities = 198/651 (30%), Positives = 274/651 (42%), Gaps = 118/651 (18%)

Query: 11  IVIILICFGSC-KKDFLDKLPITDIAPQTFFKNEKDLELYCNGLYSLVPGAGI----MTD 65
           I I  +   SC   DFL++ P+ D   +T F+   + + Y  GLY  +P  G      TD
Sbjct: 6   IFICTVLLASCLNNDFLERYPLGDPTAETAFETYDNFKAYAWGLYETLPSLGYGSENSTD 65

Query: 66  DTQSDNMETLPYDKVVAGEYLVPSTGGGWSW---SYLRSVNYFLENYGKANAAAEAKNHY 122
           D   +          +     +P      SW   SY+R VN  L+    +      K ++
Sbjct: 66  DISYNQTRGTSESNWIRKLVTIPDKKDNTSWNYYSYIRRVNLMLDRIDGSKMTDVEKANW 125

Query: 123 VGVARLFRAWFYFDKVKRFGNVPWYSGTMNINDEAQLYK-PQDPRTLVMDSVLKDLDYAS 181
             V   FR++ Y   +  +G VPW    ++ +DE +L K P+  R  +   +L+DL +A 
Sbjct: 126 RSVGYFFRSYRYLSLLSAYGGVPWIDHVLS-DDETELIKGPRASRDEIAGHILEDLQFAE 184

Query: 182 ANIRTSKTPLWTINRYVALSLKSRICLFEGTWRKYRGIADADRFLIAAKDAAKKVIDEGG 241
            NI  +     TIN+    +L SR CLFEGTWRKY G+ +A+ +L   K  + +++    
Sbjct: 185 KNINVNGEGRNTINKACVQALLSRFCLFEGTWRKYHGLNNAETYLRECKRVSAELMQT-- 242

Query: 242 YSLYTTGKPDVD--YLNLFAMSDAPQ-NEVILAYEYSTILNLRHAFSAESGAYGRGF--- 295
                   P+V   Y +LF   +      VIL  EYS  + + HA S   G     F   
Sbjct: 243 -------YPNVADCYDDLFCSLELKDVTGVILYREYSDAVGVVHAVSI-GGTTATSFYNP 294

Query: 296 TKEMVNSYLMKDGTP-FTSVAGYATKTYMDEFENRDPRLIQTVLNPLYTRTDR------- 347
           T+++V+SYL  DG P +TS A    K   DEF NRD RL   V  P   R DR       
Sbjct: 295 TRDLVDSYLCTDGKPRWTSDAYLGDKDIYDEFSNRDHRLWLHVTPPY--RVDRSASSTAW 352

Query: 348 ------TDASKRFSPIPKIPGGTPTGYLQVK------------------------FYQDD 377
                 TD SK  S I  +      GY   K                        FY ++
Sbjct: 353 DNKWKFTDNSKDRSFIDSLTVRMGIGYGTSKERQKLLPFRQGYDGGILGASPHFDFYLEN 412

Query: 378 P--IKEIYG-----------------QSDNDAPVIRYAEVLLNYAEAMAELGTITQADLD 418
               K  +G                   + D P+ R  EV+LNYAEAM ELG   Q   D
Sbjct: 413 QPWYKSAFGYNNWKYYCCYLSMGSQRNEETDMPIFRIEEVMLNYAEAMCELGEFDQTVAD 472

Query: 419 LTINKLRDRVGMTGAAHLNMGVAIDPVLAAQYPDVS-----SALILEIRRERRVELAGEG 473
           +TINKLR R  +       +  A DP      PD       S L+ EIRRERR+EL  EG
Sbjct: 473 VTINKLRPRANVKLMKVSEINSAFDPKRDLGNPDYPNDYEVSPLLWEIRRERRIELFSEG 532

Query: 474 FRYSDILRWKAGNLLAKKFYGIYFPGLGEYDLTKDGKLDFAIVAAIPAVKTPGVTYAVIN 533
           FR+ D+ RWK  +   KK        LG+Y    D               T G    +  
Sbjct: 533 FRFDDLRRWKKCHYALKK-------KLGQYVRASD--------------FTAGTNVTID- 570

Query: 534 KDIYLSNGNSGNIVPYPNQTKTFNENKNYLFPIPTSELLLNKNLIQNPGWQ 584
                  G+ G +  +P Q   +  +  YL PIP +E +LN  L QNPGW+
Sbjct: 571 -----GGGSEGYLEFHPKQNHLW-PDYYYLNPIPRNERVLNPQLEQNPGWE 615