Pairwise Alignments

Query, 1192 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 999 a.a., TonB-dependent receptor for dextran (SusC-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  429 bits (1102), Expect = e-124
 Identities = 337/1068 (31%), Positives = 521/1068 (48%), Gaps = 135/1068 (12%)

Query: 154  VNIEGKIVDSKGAPLPGASVKVKGTTKATTANTEGKFSLVADKNDVLLISFVGYKTKEVP 213
            + ++G +VD+ G P+ GASV    +T  T  + +G FSL    N  L ISFVGYKT+ V 
Sbjct: 32   ITVKGHVVDATGEPVIGASVIEGKSTNGTITDIDGNFSLNVSANSALTISFVGYKTQTVS 91

Query: 214  LNGQSTLTIQLEESAAELSDFVVVGYGSTKKVNLTGAVSTVSGDVLKDRPISNIAQGLQG 273
            +NG++ L + L+E    L + VVVGYG+ KK +LTGAVS+V    +KD P++NI Q +QG
Sbjct: 92   VNGKTALKVTLQEDTEVLDEVVVVGYGTMKKSDLTGAVSSVGVKDIKDSPVANIGQAMQG 151

Query: 274  VIPNLTITNFSGQPGRTSDLNIRGYESINGGSPLIVIDGVPTTSNSSLYSLNPQDVENIT 333
             +  + I + +G+PG    + IRG  +IN  +PL+VIDG+PT  +  L SLN  DVE + 
Sbjct: 152  KVSGVQIID-AGKPGDNVTIKIRGLGTINNSNPLVVIDGIPT--DLGLSSLNMADVERVD 208

Query: 334  VLKDAASAAIYGGRATFGVILITTKSGKFNSGLNIEFSSNFSDKRLTELPNIVTDPATVM 393
            VLKDA++ AIYG R   GV++IT+K G   +G  +  ++N++ +  T++P+++       
Sbjct: 209  VLKDASATAIYGSRGANGVVMITSKRGAEGAG-KVTVNANWAIQNATKVPDML------- 260

Query: 394  RVKNEGYKAYYGTDLYNQTFMDYANKRSADPSLPPYYIDPADPTKYVYVGSTNWFDELFR 453
               N    A    D+ +            D +  PY+ DP+   K      TNW DE+ R
Sbjct: 261  ---NAAQYAALSNDMLSNN----------DDNTNPYWADPSSLGK-----GTNWLDEMLR 302

Query: 454  KNTPTWDNNLSIRGGTEKVTYNVSAGYLRQEGLFEGNPDVYSRYSLRSKTEFKATSWLKL 513
                    ++S  GGTEK  Y VS G+L Q G+ +     Y R++ ++ ++ +   WLK 
Sbjct: 303  TGVKQ-SYSVSYSGGTEKAHYYVSGGFLDQSGIVKSVN--YRRFNFQANSDAQVNKWLKF 359

Query: 514  GNTTQLS-----RTGYKYPTLWNGPSRGDLFHAIGRIPSFEIVNNPNGSYTANG---VLL 565
              TT L+     + G  Y       S GD   A+   P    V N +GS++  G      
Sbjct: 360  --TTNLTFSTDVKEGGTY-------SIGDAMKALPTQP----VKNDDGSWSGPGQEAQWY 406

Query: 566  GYLKDG------GRGESQKNDYLTTFEAQTNFFK-NSLRVTTNYTFQSVNGNFLDPYIPL 618
            G +++          E++  ++L     +  F K   L+ T  Y        F D + P 
Sbjct: 407  GSIRNPIGTLHMMTNETKGYNFLANITGEITFTKWLKLKSTFGY---DAKFWFADNFTPA 463

Query: 619  EYQYANPNVNIQDGQSGLGQGYNTSKYNVFNVFGEYEKNFG-KHNVKAMAGYSQEGYHED 677
                 NP       +S   +  N S   +++ +  ++  F  KH V  MAG S +  + D
Sbjct: 464  YDWKPNP-----VEESSRYKSDNKSFTYLWDNYFVFDHTFAKKHRVGVMAGSSAQWNNYD 518

Query: 678  SNSIFRNDLISSNTPNIGLALGNPSYTSTAGEWALRSQFFRVNYAYDNKYLLEVNGRRDG 737
              +  +N  +  N   +       S   +  +WAL S   R+NY+Y++KYLL    RRDG
Sbjct: 519  YLNAQKNIFMFDNIHEMDNGEKMYSLGGSQSDWALLSLMARLNYSYEDKYLLTATVRRDG 578

Query: 738  SSRFPVDDRYVFLPSGSIGWRVSEENFFKGLKPAISDFKLRFSYGSLGNQTVSKAG---S 794
            SSRF  ++R+   PS S+ WRVS+E++F      ++D KLR  YG  GNQ +   G   S
Sbjct: 579  SSRFGKNNRWGTFPSVSLAWRVSQEDWFPKDNFLMNDLKLRVGYGVTGNQEIGNYGFVAS 638

Query: 795  SDPDYYPYIPLMSSSSKITNILGGNQPPAVYAPGLVSPSLTWERQYTKNWGTDIALMGNK 854
             +   YP+              G N   A+ +  L +P++ WE     N+G D++L  ++
Sbjct: 639  YNTGVYPF--------------GNNNSTALVSTTLSNPNIHWEEVRQANFGVDMSLFDSR 684

Query: 855  LNISYDYYIRDVKDMLTSSRQLPAVLG---TPPPRTNAADLRTRGWELSL---NYNNKFN 908
            +++S D YI++  DML  +  +P   G   T    TNA  +R +G E++L   N    F+
Sbjct: 685  VSLSLDAYIKNTNDMLVKA-SIPITSGFEDTTETFTNAGKMRNKGVEMTLRTINLKGIFS 743

Query: 909  LASS-DFKYNFRFVLADNYTVITKFDNPNGN--IGEYYVGKRIGEIWGMETEGLFQSDAE 965
              S+    YN   +L D  +    F N  GN  +     G  I   +G  T+GLFQ+  E
Sbjct: 744  WESALTATYNKNEIL-DLNSETPMFINQIGNSYVTMLKAGYPINVFYGYVTDGLFQNWGE 802

Query: 966  VAAHADQSAVDGYYGFHAGDPKYRDLNGDGKINIGKLTLGDHGDLKVIGNREARYTYGIS 1025
            V  HA Q       G   GD ++RDLN DG IN          D  ++GN    + + +S
Sbjct: 803  VNRHATQP------GAAPGDIRFRDLNNDGVIN--------DEDRTILGNPNPNWFFSLS 848

Query: 1026 GGFNWKGFDMSFFLQGVAKRDFWLGTSSYFWGTYRAPWEHVYQHQLDNMWSPENPDAYFP 1085
               ++KG+++S FLQGVA    +   +    G   A   +     + N W+ E      P
Sbjct: 849  NNLSYKGWELSVFLQGVAGNKIYNANNVDNEGMAAA---YNQTTAVLNRWTGEGTSYSMP 905

Query: 1086 RYAAWRTGDIAEWRDLDV---VQTRYLQDASYLRLKNLTIGYRLPEKLVKRIGLKSFRFY 1142
            R         A W D +    V  R++++ SYLRLKN+T+ Y LP+K +++I L++ R  
Sbjct: 906  R---------AIWGDPNQNCRVSDRFVENGSYLRLKNITLSYTLPKKWLQKIQLENARIS 956

Query: 1143 LSGENIGEINNIKFKVLDPET-LGGDGSSSWGTGKSYPFQRSYSAGIN 1189
             S EN+  I   ++   DPE  + G  SS       YP  R++S G+N
Sbjct: 957  FSCENVATIT--RYSGFDPEVDVNGIDSS------RYPISRTFSMGLN 996