Pairwise Alignments

Query, 474 a.a., permease from Pedobacter sp. GW460-11-11-14-LB5

Subject, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 2/209 (0%)

Query: 8   LIKAFVKPFIATFFVMMFILLMFFLFKWIDDLIGKGFEWYTILELMYYASAANVSMALPL 67
           LI+  +K   A FFV+  + L     + + D          IL ++     A   + LPL
Sbjct: 7   LIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGLLMLPL 66

Query: 68  SVLLSSIMTFGTLGENYELVAIKSAGISLQKAMRPLFVVILILTVSSFFFANYMLPKANL 127
           S+ +  ++TFG L    E+  + + GI  +  +R    + LI    + F A ++ P +  
Sbjct: 67  SLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLAPWSQD 126

Query: 128 KFGSLLYDIRNKKLSFLIKPGVFNNAIPGYAIRVDSKEEDGTLHNIMIYDHRENNGI-PK 186
           K   L+     +    L++ G F  +  G ++      E+  L+N+ +      + I P 
Sbjct: 127 KEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPRDSILPS 186

Query: 187 VILAREGKMNKTSDGKFLVLNLKNGVQYE 215
           V+ +  G + + SDG+  ++ L +G +YE
Sbjct: 187 VMFSHSGDVKELSDGR-QIITLYDGTRYE 214



 Score = 35.0 bits (79), Expect = 4e-06
 Identities = 19/71 (26%), Positives = 33/71 (46%)

Query: 362 ATVEYQRKFTLAASCILLFFIGAPLGAIIRKGGMGLPVVVAICFFLVYHIITTVAEKSAR 421
           A  E Q + +L     LL  +  PL A+  + G    +  AI  +L Y +  +  + +  
Sbjct: 262 AQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGRFAKMGPAILIYLTYFLALSATKSAIE 321

Query: 422 EGNLNPIFGMW 432
           +G+L  I G+W
Sbjct: 322 DGSLPVIIGLW 332