Pairwise Alignments

Query, 513 a.a., F0F1 ATP synthase subunit alpha (RefSeq) from Shewanella loihica PV-4

Subject, 510 a.a., ATP synthase alpha chain from Caulobacter crescentus NA1000

 Score =  583 bits (1504), Expect = e-171
 Identities = 303/519 (58%), Positives = 389/519 (74%), Gaps = 20/519 (3%)

Query: 1   MQLNSTEISDLIKQRIEQFEVVSEARNEGTIVAVSDGIIRVHGLADVMQGEMIELP-GNR 59
           M + + EIS ++K +I  F   +   + G +++V DGI R++GL +V  GEM+E P    
Sbjct: 1   MDIRAAEISAILKSQIANFGEEAAVSDVGQVLSVGDGIARIYGLDNVQAGEMLEFPKAGV 60

Query: 60  YAIALNLERDSVGAVVMGPYADLAEGQKVKTTGRILEVPVGRGLLGRVVNTLGQPIDGKG 119
             +ALNLERD+VGAV+ G   ++ EG +V+  G I++VPVGRGLLGRVVN LG+PIDGKG
Sbjct: 61  KGMALNLERDNVGAVIFGQDQEIKEGDEVRRLGEIVDVPVGRGLLGRVVNPLGEPIDGKG 120

Query: 120 PIDNDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELVIGDRQTGKTALA 179
           PI       V+V APG+I RKSV +PVQTG K++D++IP+GRGQREL+IGDRQTGKTA+A
Sbjct: 121 PIQYTERRRVDVKAPGIIPRKSVHEPVQTGLKSIDTLIPVGRGQRELIIGDRQTGKTAVA 180

Query: 180 IDAIINQK--------DSGIKCVYVAVGQKASTIANVVRKLEEHGALANTVVVVATASEA 231
           ID I+NQK         + + CVYVA+GQK ST+A +V+ LEEHGAL  T VVVA+ASE 
Sbjct: 181 IDTILNQKAVNAGKDESAKLYCVYVAIGQKRSTVAQIVKTLEEHGALEYTTVVVASASEP 240

Query: 232 AALQYLAPYSGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVF 291
           A LQYLAP++GC+MGE+FRD G   LI+YDDLSKQAVAYRQ+SLLL+RPPGREAYPGDVF
Sbjct: 241 APLQYLAPFAGCAMGEWFRDNGLHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 300

Query: 292 YLHSRLLERASRVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDG 351
           YLHSRLLERA+++N +      NG     +GSLTALPIIETQA DVSA++PTNVISITDG
Sbjct: 301 YLHSRLLERAAKLNED------NG-----SGSLTALPIIETQANDVSAYIPTNVISITDG 349

Query: 352 QIFLETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFAS 411
           QIFLETDLF  G+RPAVN GISVSRVG +AQ K +K+++G I+  LAQYRE+AAF++F S
Sbjct: 350 QIFLETDLFYQGIRPAVNVGISVSRVGSSAQIKAMKQVAGPIKGELAQYREMAAFAKFGS 409

Query: 412 DLDDATRAQLEHGERVTELMKQKQYAPMSVADQSVSIFAAEKGYLKGVELNKIGDFEASL 471
           DLD +T+  L  GER+TEL+KQ QYAP+SV +Q   I+A  +GYL G+  + +  FEA  
Sbjct: 410 DLDASTQKMLARGERLTELLKQPQYAPLSVEEQVCVIYAGTRGYLDGIPTSSVRRFEAEF 469

Query: 472 LSYMNSEHADLMKTINETGDYNADIEGGLKAGLDKFVET 510
           L+ ++S+HADL++ I      + D+E  LK+ LD F  T
Sbjct: 470 LARLHSQHADLLEGIRTKKALDKDLENTLKSALDSFSST 508