Pairwise Alignments

Query, 475 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 474 a.a., cytochrome c oxidase accessory protein CcoG from Vibrio cholerae E7946 ATCC 55056

 Score =  589 bits (1519), Expect = e-173
 Identities = 283/464 (60%), Positives = 342/464 (73%), Gaps = 9/464 (1%)

Query: 17  KIHQPDENKS---DRFNPRNRIYVRAIEGFWTQLRRRLGWVAMLFFLILPWIPWGDRQAV 73
           K+  P  +K    DRFNP NRIYVR  +G + +LRR  GW  +L F ++PWI +GDRQA+
Sbjct: 14  KVFNPKTHKGQGGDRFNPSNRIYVRESKGTYQKLRRYGGWFLLLLFGLVPWISYGDRQAI 73

Query: 74  WFNLGEQKFHIFGLTIWPQDLTLLAALLMIAAFGLFFVTTYLGRVWCGYTCPQTVWTFIF 133
             ++G Q+F+ FG T++PQDLTLLA L MIAAFGLFF+TT+LGRVWCGY CPQTVWTF++
Sbjct: 74  LLDIGNQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMY 133

Query: 134 IWFEEKFEGARNKRMKLDQMPWSFNKVWRKTAKHLSWLLVSLLTAMTFVSYFVPTTEVYA 193
           IWFEEK EG  NKR K D  P +   V RKT KH++WL ++L+T  TFV YFVP   +  
Sbjct: 134 IWFEEKLEGNANKRRKQDNSPMTAELVARKTLKHIAWLAIALVTGFTFVGYFVPIRALVI 193

Query: 194 DVFSGSASGAIYFWVTLFTVATYGNAGWMREIMCIHMCPYARFQSAMFDKNTFIVGYDTK 253
           D F+ SA+    FWV  F + TYGNAGWMR IMCIHMCPYARFQSAMFDK+TFIVGYD  
Sbjct: 194 DFFTLSAAFWPVFWVLFFALCTYGNAGWMRSIMCIHMCPYARFQSAMFDKDTFIVGYDVA 253

Query: 254 RGEDRGPRSRKADPKALGLGDCIDCDLCVQVCPTGIDIRNGLQYECINCGSCIDACDTTM 313
           RGE RGPRSRKADPKALGLGDCIDCDLCVQVCPTGIDIR+GLQYECINCG+CIDACD TM
Sbjct: 254 RGEQRGPRSRKADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQYECINCGACIDACDNTM 313

Query: 314 ERMGYDKGLIAYTTENKLEGVKEKVLRPKLLGYGAVLALMILVFIYATVTIAPVRIDIIR 373
           ERMGY KGLI+YTTE++L G   KV+RPKLLGYGAV  +MI +F      + P  + ++R
Sbjct: 314 ERMGYAKGLISYTTEHRLSGKHTKVMRPKLLGYGAVFLVMIGLFFAQVAAVDPAGLTVLR 373

Query: 374 DRNQLFRENDQGLIENTFTLKILNKTEAKHEYQLSVEGLPDYQWYGPQSVTIEGGEVLTL 433
           DR QLFR N  G IENT+ LK++NKT+    YQLSV+GL    WYG QSV ++ GEVL L
Sbjct: 374 DRTQLFRTNSSGEIENTYNLKVINKTQQPQTYQLSVKGLDPVSWYGKQSVVVQPGEVLNL 433

Query: 434 PVSVAVDPVGLSRAMTRVDFKVTTVLDGETVEAT--QESRFFSQ 475
           P+++   P  LS A+T + F    +L  E+ + T   ESRF  +
Sbjct: 434 PMTLGAKPENLSSAVTTIQF----ILHDESHQFTLEVESRFIQK 473