Pairwise Alignments

Query, 517 a.a., TAP domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 539 a.a., hydrolase, alpha/beta hydrolase fold family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  615 bits (1587), Expect = 0.0
 Identities = 308/486 (63%), Positives = 374/486 (76%), Gaps = 3/486 (0%)

Query: 20  LALLLLSQPTWADTQPADQQDSKSESCYVDDLSDRLRCGAITVPENYAKPQGKQIQIHYL 79
           L L + S   WA  +P     + + +CYV+ +SDRL+CG +TVPEN  +P GKQIQ+HY+
Sbjct: 41  LMLAMCSATVWASDKPTPPT-TPTNTCYVEGVSDRLQCGFVTVPENPNQPDGKQIQVHYV 99

Query: 80  VLPAIKPSFEKEALLAIAGGPGQSAIDNAASFDKIFTKVRQQRDILLIDQRGTGLSNQLV 139
           VLPA+K +  +EALLAIAGGPGQSAIDNAASF+ +  KVRQQRDILLIDQRGTG SN L 
Sbjct: 100 VLPAVKNANHEEALLAIAGGPGQSAIDNAASFNTVLNKVRQQRDILLIDQRGTGRSNLLN 159

Query: 140 CEGAGFEGGLAFNDDELNIATETKACLAKI-DADVSQYGSETALKDFEAVRQALGYQKLH 198
           C+ AG +  LAFNDD ++   E + C  ++  +DV+QYGS  A+KDFEAVR  LGY+KLH
Sbjct: 160 CD-AGPQSLLAFNDDNVDSLAEAQKCRDQLAGSDVTQYGSLNAVKDFEAVRAHLGYKKLH 218

Query: 199 LYGISYGTRMAQLYMRHYPEALATVTLDGVVPMQQSVLNIGDAITRAIDLLLKDCQGNAL 258
           LYGISYGTRMAQLYMR YPE LATVTLDG+VPMQQSVL IG AI R  DLL KDCQ  A 
Sbjct: 219 LYGISYGTRMAQLYMRLYPEHLATVTLDGIVPMQQSVLEIGSAIERGFDLLFKDCQETAA 278

Query: 259 CHQEFPNLKAELDQVEAQLSQGPQISQTRDPLTNAPTQLTMTRAKFMGAIRMALYMPNVR 318
           CH +FP LKAE DQV A+L++GP + Q  DP+T   T LTMTRAKF GAIRMALY  NVR
Sbjct: 279 CHAKFPELKAEFDQVVARLTEGPIMEQVHDPVTGEKTLLTMTRAKFYGAIRMALYQTNVR 338

Query: 319 ALLPHAIHQAAEGNFQAIMGLYALTMNSTGIAAGMHSAVVCGEDWHRFSEAERQQIGQSY 378
           AL+PHAIHQAA+GN+Q ++GLYALT +  G+A GMH++VVCGED HR + A R+Q   SY
Sbjct: 339 ALVPHAIHQAAKGNYQPLLGLYALTTDGAGMAMGMHASVVCGEDIHRITPAMREQAKTSY 398

Query: 379 FGREMLEAFDLSCPIWHIPAVGEDFSAPIASALPTLVLSGQIDPATPPSWGELAMAKLTN 438
            G+ MLE+ + SC +W +P V   FS PI S +PTL+LSG+IDPATPPSWGELAM KLTN
Sbjct: 399 VGKTMLESLEASCSVWKVPPVDASFSEPIKSDIPTLLLSGEIDPATPPSWGELAMEKLTN 458

Query: 439 AKHFVAPYATHGVAYQSCANTLIAELISSGSVDGLSQECLSKDISRNFYLNANTVEAIPQ 498
           AKHF+APYATHGVAYQSCAN L+AEL+ +GSV  L  ECL KD+ R+FYLNA++VE +  
Sbjct: 459 AKHFIAPYATHGVAYQSCANNLVAELVRTGSVKDLDGECLKKDVRRSFYLNASSVEPLTT 518

Query: 499 DTLSHS 504
           +  ++S
Sbjct: 519 EAATNS 524