Pairwise Alignments

Query, 416 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score = 52.4 bits (124), Expect = 4e-11
 Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 19/186 (10%)

Query: 85  ILNILLPLALVEHPLLSSLADRLLDVAIVILFVRAVYS-VLDAGNEIADVNQISRRLPIK 143
           +LN  +  ++V H   +SL + L   A+  LF   ++  +L A    A V +   R  + 
Sbjct: 273 LLNTQVVFSIVRH-WSNSLVNWLASNAVQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVN 331

Query: 144 S------------FVQLLKLFMFFVAIVISISVLA-EQSPVYFLSGLGVATGLVMLVFKD 190
           S            FV +    ++ + I++ +S +    +PV  L+G G+A  ++    +D
Sbjct: 332 SKNIRISHLMQDFFVSMSGKVVWVIGILVGLSQIGLNLAPV--LTGFGIAGVIIGFALQD 389

Query: 191 TILGFVAGIQLAANRMVSPGDWIQMDKYGADGAVEEVSLTTVKVQNWDKTITMIPAYALV 250
           T+  F AG+ L   R    GD++     G DG V  +SL    ++ +D  I ++P   + 
Sbjct: 390 TLSNFAAGMMLLIYRPFDVGDFVHAG--GVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIW 447

Query: 251 SDAFKN 256
            D  KN
Sbjct: 448 GDVIKN 453