Pairwise Alignments

Query, 416 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

Subject, 351 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 64/283 (22%), Positives = 128/283 (45%), Gaps = 32/283 (11%)

Query: 29  VMVFACLLIAFIGYVVVKRGVVSTMNIVIQRSKVRWDDIFMQHRVLEKLAKLVPALILNI 88
           + +F  +    + Y+ + + V     ++  ++K + DD+ +        A  +P +I+  
Sbjct: 20  IFIFFGVFFGKVMYIFLNKYV----RVLAGKTKTKLDDVVLD-------AVEIPLIIVVF 68

Query: 89  LLPLA-----LVEHPLLSSLADRLLDVAIVILFVRAVYSVLD--AGNEIADVNQISRRLP 141
           +L        LV    LS   +  L VAI    V  +  ++D    N +  + + S    
Sbjct: 69  VLFFKYGLNNLVLPDNLSLWLNESLTVAITFAGVLFLLKIVDDIIVNYVVPIVEKSENTL 128

Query: 142 IKSFVQLLKLFMFFVAIVISISVLAEQ---SPVYFLSGLGVATGLVMLVFKDTILGFVAG 198
               V L++  + F+ ++  + ++      +    L+GLG+    V L  KDTI   +AG
Sbjct: 129 DDQLVPLMRKLVKFLILIAGLMLILSNVGYNISALLAGLGIGGLAVALAAKDTIENLIAG 188

Query: 199 IQLAANRMVSPGDWIQMDKYGADGAVEEVSLTTVKVQNWDKTITMIPAYALVSDAFKNWR 258
             +  +R    GDWI+    G +G VEEV + + +V+++  T+  +P   +V    +N+ 
Sbjct: 189 FIIIVDRPFKLGDWIKWG--GKEGIVEEVGIRSTRVRSFGDTLITVPNANIVQTEIENF- 245

Query: 259 GMSESGGRRIKRAVNIDIDSIAFLSDEQLKRLGKI--NLLKEY 299
             SE   R++K  + +  D+      E++KR  +I  N+L ++
Sbjct: 246 --SERRKRQVKATIGLTYDTPV----EKVKRAKEIIENVLNDH 282