Pairwise Alignments

Query, 594 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 604 a.a., Uncharacterized protein conserved in bacteria from Sphingomonas koreensis DSMZ 15582

 Score =  283 bits (724), Expect = 1e-80
 Identities = 195/600 (32%), Positives = 291/600 (48%), Gaps = 25/600 (4%)

Query: 13  SLTACQMAPTADVATTPKTSVSQSHQQLQRIMDDAWQLRLESSPEMAYAQGDETAA---- 68
           +L A  + P    A   + S S+   +L  I +  +   LE+ PE   A G +  A    
Sbjct: 6   TLIATALLPALAPAVRARESQSEEGTRLTAIYEKLYDRLLETDPEFCTALGLDKGAYAGA 65

Query: 69  -GKLDDLSPEALANHNQAEQALLARLNALDLASLNKADRIDAQILIYQLQNSVDQYRFHD 127
             KL D SP  +   +   +  L +L  +D + L+  D ++ +      Q+ V  Y    
Sbjct: 66  KSKLTDRSPAGIRRQHDLYREGLKQLATIDPSKLSGMDLVNYETFQGPWQSFVKAYDTFS 125

Query: 128 HYL-------PITAESGFHAYIASIAKGNFN--SEADYRNYLSKLEALPRYFSQQTYWLK 178
           + L       P+T  SG +  I        +  + AD   YL++     +    +T  ++
Sbjct: 126 YGLHSWPEPHPVTQLSGIYRSIPDFLTNQHSIANAADAEAYLARCRDFAKQLDNETGRIQ 185

Query: 179 QGLAQGITPARVVLNGFEESISAFIVPVEQSGYFKPFTHFPKHFTQAQKAELTEQGKALI 238
                G+ P   V++   E  +    P  ++      T+  +  TQA   +   +   ++
Sbjct: 186 TDHVAGVIPPDFVIDRTLEVYARVAAPAPEANIL--VTNLTRK-TQAIPGDWATRCAKIV 242

Query: 239 EQNVLPSYQAFYDFMTQEYIPGARESIAAYDLPDGKAFYENRVRYYTTLPMTADEVHQLG 298
             ++ P+ Q     + +   P A      + LP G  +Y+  +RY TT  M   EVHQLG
Sbjct: 243 SGDIYPAMQRQIAEL-RRVRPRATHDAGVWRLPQGADYYDYALRYATTTGMKPQEVHQLG 301

Query: 299 LKEVKRIRAEMQAIIDKLGY-QGSFADFLHFLRTDPQF-YAKTPE---QLLKEAAFIAKK 353
           L+++  + A   AI+   G  +GS A  L  L  DP+F Y  T     +L+ E      +
Sbjct: 302 LEKMADLTARADAILRAQGMTEGSVAQRLRALGKDPRFIYPNTDAGKAKLIAELNAQIVE 361

Query: 354 ADAMLPKFFGKLPRTPYGIQEVPAEIAPKYTTGRYSGASGD-DQPGYYWVNTYALDKRPL 412
               LP+ FG+LP+T   I+ VP EI    T G Y   S D  +PG Y++N     + P 
Sbjct: 362 MQRRLPEMFGRLPKTLVEIRRVPPEIEAGATAGYYQIPSADGSRPGAYYINLRDTAENPR 421

Query: 413 YELEALTLHEAVPGHHLQISLNKELTSLPNFRRYSYISAFGEGWGLYSEYLGLEGGFY-Q 471
           + L  LT HEA PGHH QI+L +E   +P  RR    S + EGWGLY+E L  E G Y  
Sbjct: 422 WTLPTLTYHEATPGHHHQIALAQEAAGIPRLRRLPVYSVYTEGWGLYAEQLADEMGAYAD 481

Query: 472 DPYSNFGRLTYEMWRAARLVVDTGMHAKGWTRQQAIDYMAGNTALSLHNVTTEIDRYISW 531
           DP+   G L   M+RAARLVVDTG+H   W+R++AI YM            TE++RY  W
Sbjct: 482 DPFGRLGYLQSYMFRAARLVVDTGLHHMRWSREKAIQYMNDALGTPERGNITEVERYCVW 541

Query: 532 PGQALSYKIGELTIKRLRAKAEQALGEKFDIRAFHDAVLANGSVPMALLEQQIDDFIAAQ 591
           PGQA SY +G+     +R KA +ALG+KFDIRAFHD  LA G++P+++LE  ID ++AAQ
Sbjct: 542 PGQATSYMVGQTRWVAIREKAHKALGDKFDIRAFHDTALAAGAMPVSVLESMIDRWVAAQ 601