Pairwise Alignments

Query, 594 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 606 a.a., Uncharacterized protein conserved in bacteria from Sphingomonas koreensis DSMZ 15582

 Score =  242 bits (618), Expect = 3e-68
 Identities = 181/588 (30%), Positives = 283/588 (48%), Gaps = 32/588 (5%)

Query: 25  VATTPKTS-----VSQSHQQLQRIMDDAWQLRLESSPEMAYAQGDETA--AGKLDDLSPE 77
           VA  P T+        +  + + ++D  ++ RL  SPE A + G +T   A     LS  
Sbjct: 18  VAALPATARQAKAAGSADAKFRVLLDKIFEDRLTESPEGATSLGLDTGKNAALKSQLSGR 77

Query: 78  ALANHNQ---AEQALLARLNALDLASLNKADRIDAQILIYQLQNSV---DQYRFHD---H 128
            LA+  +     +  LA +      +L +  R+D  ++ YQL+ S+   +Q+ + D    
Sbjct: 78  TLADDARDLARSKRELAMVRGFAPETLGEDARLDQDVVTYQLERSIAGREQFTYGDSGGR 137

Query: 129 YLP--ITAESGFHAYIASI--AKGNFNSEADYRNYLSKLEALPRYFSQQTYWLKQGLAQG 184
           ++P  ++  SG +  +      +       D   YL++L A      Q+T   +   A+G
Sbjct: 138 FVPFRLSQLSGAYREVPDFLDTQHRVKDAVDADAYLARLGAFANVIDQETARQRADAARG 197

Query: 185 ITPARVVLNGFEESISAFIV-PVEQSGYFKPFTHFPKHFTQAQKAELTEQGKALIEQNVL 243
           +     +L+   +  +A    P  ++G    +    K        E   Q   ++ + V 
Sbjct: 198 VFAPDYILDTTLKQFAALRERPAAETGLVTSYA--AKLRAANLPPERAAQAAKIVAEKVF 255

Query: 244 PSYQAFYDFMTQEYIPGARESIAAYDLPDGKAFYENRVRYYTTLPMTADEVHQLGLKEVK 303
           P++      +T E    A      + LPDG+A+Y       TT+ MT DE+H+LGL++V 
Sbjct: 256 PAFDRQRALVT-ELRGKAVHDAGVWRLPDGEAYYAAAAEAATTVRMTGDEIHKLGLEQVA 314

Query: 304 RIRAEMQAIIDKLGY-QGSFADFLHFLRTDP-QFYAKTP---EQLLKEAAFIAKKADAML 358
            I A +  I+   G  +G+    L  L   P Q +  T    E LL+      +  +  L
Sbjct: 315 EISARIDTILRSQGISEGTVGARLVALNERPDQLFPNTDPGREALLETLRAQVRAMEKRL 374

Query: 359 PKFFGKLPRTPYGIQEVPAEIAPKYTTGRYSGASGD-DQPGYYWVNTYALDKRPLYELEA 417
           P+ F  LP+ P  ++ VP  I      G Y  A+ D  +PG Y++N      RP + L  
Sbjct: 375 PEQFASLPKAPVEVRRVPPSIQAGAPGGYYQAATLDGSRPGIYYINLRDTFDRPKFGLAT 434

Query: 418 LTLHEAVPGHHLQISLNKELTSLPNFRRYSYISAFGEGWGLYSEYLGLEGGFYQ-DPYSN 476
           L+ HEAVPGHHLQ+ L  E +++P  RR    S + EGW LY+E L  E G Y+ DP   
Sbjct: 435 LSYHEAVPGHHLQVMLALESSAIPLIRRRGGFSGYSEGWALYTEQLADEMGMYEGDPLGQ 494

Query: 477 FGRLTYEMWRAARLVVDTGMHAKGWTRQQAIDYMAGNTALSLHNVTTEIDRYISWPGQAL 536
            G L   ++RA RLVVD+GMHAK W+R++A DY    T ++      EIDRY  WPGQA 
Sbjct: 495 VGYLQSLLFRATRLVVDSGMHAKRWSREKATDYFIATTGIARGRSQGEIDRYTVWPGQAC 554

Query: 537 SYKIGELTIKRLRAKAEQALGEKFDIRAFHDAVLANGSVPMALLEQQI 584
           SYKIG      LR +A+   G ++D R FHD VL  G++P+ +L++ +
Sbjct: 555 SYKIGHTVWVELRDEAKAKAGAQWDPRKFHD-VLRKGAMPLDVLKRVV 601