Pairwise Alignments

Query, 446 a.a., coproporphyrinogen III oxidase (RefSeq) from Shewanella loihica PV-4

Subject, 460 a.a., coproporphyrinogen III oxidase from Pseudomonas fluorescens FW300-N2C3

 Score =  448 bits (1153), Expect = e-130
 Identities = 229/451 (50%), Positives = 306/451 (67%), Gaps = 6/451 (1%)

Query: 1   MIEKYNYSGPRYTSYPTALEFDASFTEEDLLTSIANSKSNK--LSLYLHIPFCAKLCYYC 58
           +I  Y+ +GPRYTSYPTA +F       DLL ++ +S+  +  LS+Y+H+PFCA +CYYC
Sbjct: 11  LIRHYDLAGPRYTSYPTAAQFGGQVGTFDLLHALRDSRKARRPLSVYVHVPFCANICYYC 70

Query: 59  GCNKVITRHQHKADQYIEYLAAEI-VKRAPLFKHYQVTQIHWGGGTPTFLSPEQILRLSA 117
            CNKVIT+ + +A  Y++ L  EI +    L     V Q+H+GGGTPTFLS +++ +L A
Sbjct: 71  ACNKVITKDRGRAHAYLQRLEQEIQLIGCHLDPTQPVEQLHFGGGTPTFLSHDELRQLMA 130

Query: 118 LLREHFNIAEE--GEYSIEVDPREIELSMLDTLKEAGFNRISVGVQDFNKEVQIAVNREQ 175
            LR+H N+ ++  G+Y IE+DPRE + S +  L+E GFNR+S+G+QD +  VQ AVNR Q
Sbjct: 131 TLRKHLNLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRVSIGLQDLDPAVQRAVNRPQ 190

Query: 176 DEQFIFDLIAKAKAMGFVSTNIDLIYGLPHQTPESFAETMQRVLDLSPDRLSVFNYAHLP 235
             +    ++  A+ + F S NIDLIYGLP QTP++FA T++ V+ L PDRLSVFNYAHLP
Sbjct: 191 SLEETRAVVEAARTLQFRSINIDLIYGLPKQTPDNFARTVEEVIHLQPDRLSVFNYAHLP 250

Query: 236 ARFAAQRKIKDEHLPTPQQKLEMLHQTIETLTGAGYQYIGMDHFAKPDDELAILQNEGRL 295
            RF  QR+I  + LP P+QKL ML  TIE LT AGY+Y+GMDHFA PDDELAI Q E  L
Sbjct: 251 ERFMPQRRINSQDLPNPEQKLAMLQGTIEQLTAAGYRYVGMDHFALPDDELAIAQEEATL 310

Query: 296 HRNFQGYTTQEECDLLGLGVSSISQIGDCYAQNQKDIRPYYESVDEKGHALWKGCKLNRD 355
            RNFQGYTT   CDL+GLGVS+ISQIGD Y QN  D+  Y  ++ +   A  +G   N D
Sbjct: 311 QRNFQGYTTHGHCDLIGLGVSAISQIGDLYCQNSSDLNHYQNTLADGQLATSRGWVCNAD 370

Query: 356 DEIRRAVIKQLICHFDLDMAKMDERLGIKFEEYFAEDLKLLQTFIDDKLVEVKDRKITVG 415
           D +RRAVI+QLICHF+L  A++++   I F  YFA     LQ    D L+E+ D  I V 
Sbjct: 371 DRLRRAVIQQLICHFNLVFAEIEQTFNIDFGGYFAPLWPQLQAMAKDGLIELDDTHIKVL 430

Query: 416 ETGRLLIRNICICFDVYFRDKARQQQFSRVI 446
             GRLL+R++C+ FD Y  ++  +Q+FSRVI
Sbjct: 431 PAGRLLVRSVCMVFDAYL-EQHNRQRFSRVI 460