Pairwise Alignments

Query, 679 a.a., oligopeptidase A (RefSeq) from Shewanella loihica PV-4

Subject, 694 a.a., peptidyl-dipeptidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  422 bits (1084), Expect = e-122
 Identities = 244/682 (35%), Positives = 377/682 (55%), Gaps = 16/682 (2%)

Query: 2   SNPLLSGSE----LPPFSQIKPEHIQPAVEQGIANCRQKIDEVLASGGPYTWDNLIAPLE 57
           SNP  +  +    +P F +IK EH +PA  +GI    Q I  ++AS    T+DN I  L+
Sbjct: 24  SNPFFTEFQTEYGVPSFDKIKLEHYEPAFLKGIEEQNQNIQAIIASPEVPTFDNTIVALD 83

Query: 58  QVDDELSQIWSPVSHMNSVLSTDEWRAAHDACLPLLSEYGTYVGQHQGLYQAYKALKESD 117
                L ++ +   +M    +TDE         P+LSE+   +  +Q L++    + +  
Sbjct: 84  SSAPILDRVSAIFFNMTDAETTDELTELSIKMAPVLSEHEDNISLNQELFKRVNVVYQQK 143

Query: 118 EFAQLSQAQQTSITHSLRDFELSGIGLNDEDKQTYGKLVKRLSELTSSFSNQLLDATQAW 177
           +   L+  Q+  +  + + F  SG  L+ E +    ++ K LS L  +FSN +L+   A+
Sbjct: 144 DSMNLTTEQKRLLDKTYKGFVRSGANLDAEKQARLREINKELSTLGITFSNNILNENNAF 203

Query: 178 TKLVTDEQELAGLPESAIAAAKAMAEAKEQQG-WLFTLDFPSYLPVMTYSDNRQLREECY 236
              V  +++LAGLPE    +A   A+A  Q G WLFTL   S LP + Y++NR LRE+ Y
Sbjct: 204 QLFVDKKEDLAGLPEWFCQSAAEEAKAAGQPGKWLFTLHNASRLPFLQYAENRPLREKMY 263

Query: 237 RAFVTRASDQGPNAGEFDNGPLMDEILDLRHQLAKLLGFDSFAHKSLATKMAESPQQVLD 296
           +A++ R ++   N    DN   + +I+ LR + A+LLGF+++A+  L   M+++   V+ 
Sbjct: 264 KAYINRGNNNDKN----DNKETIRKIVSLRLEKARLLGFNNYANFVLDETMSKNDSNVMS 319

Query: 297 FLNELAARSKQQGQNELAELTAFAEKEFGVIELAPWDLTYYAEKLKHHRYEISQELLRPY 356
            LN L + +  + + E AEL    +KE    +L  WD  YY EKL+  +Y +S+E  +PY
Sbjct: 320 LLNNLWSYALPKAKAEAAELQQLMDKEGKGEKLEAWDWWYYTEKLRKEKYNLSEEDTKPY 379

Query: 357 FPEDRVLSGLFYTVSRLFGLTIEEQEHFDSWHKDVRFFHIKDAKGEHRGSFFLDLYAREG 416
           F  + V  G F   ++L+G+T+ + E   ++H DV  F +KDA G   G F++D + R G
Sbjct: 380 FKLENVREGAFAVANKLYGITLNKLEGIPTYHPDVEVFEVKDADGSQLGIFYVDYFPRSG 439

Query: 417 KRGGAWMDDCRVRRQTAHGLQKPVAYLTCNFNAPVNGKPALFTHDEVTTLFHEFGHGIHH 476
           K GGAWM + R ++    G  +P+    C+F  PV   P+L T DEV TLFHEFGH +H 
Sbjct: 440 KSGGAWMSNYREQQ----GATRPLVCNVCSFTKPVGDTPSLLTMDEVETLFHEFGHALHG 495

Query: 477 MLTKIDVAGVSGINGVPWDAVELPSQFMENWCFEEEALAEISGHFETHEPLPKAMLDKML 536
           +LTK +  G SG N V  D VELPSQ  E+W  E E L   + H++T E +P  +++K+L
Sbjct: 496 LLTKCEYKGTSGTN-VVRDFVELPSQINEHWATEPEVLKMYAKHYQTGEVIPDEIIEKIL 554

Query: 537 AAKNFQSGMMMLRQLEFSLFDFRLHLEYDPAEGAHIQAKLDEVRDQVAVVKAADFNRFQH 596
             K F  G M    L  ++ D  LH+  D  +   + A   E  D++ ++      R++ 
Sbjct: 555 KQKTFNQGFMTTELLAAAILDMNLHMITD-VKNLDMLAFEKEAMDKLGLIPEI-APRYRV 612

Query: 597 SFAHIFAGGYAAGYYSYKWAEVLSADAFSRFEEEGIFNADTGRSFLENILEMGGSLEPME 656
           ++ +   GGYAAGYYSY WA VL  DAF  F+E GIF+ +T   F  N+LE G S +PM 
Sbjct: 613 TYFNHIIGGYAAGYYSYLWANVLDNDAFEAFKEHGIFDKNTADLFRYNVLEKGDSEDPMI 672

Query: 657 LFKRFRGREPEIDALLRHSGIQ 678
           L+K FRG EP ++ LL++ G++
Sbjct: 673 LYKNFRGAEPSLEPLLKNRGMK 694