Pairwise Alignments

Query, 182 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 220 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  107 bits (266), Expect = 2e-28
 Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 8/177 (4%)

Query: 7   LVTGLVVLGYPLAVYFGLNYLPPGVIALLLCSLLLLRLALQRQQVRAMMLPI------VV 60
           +V  L+ L YP  +     +  P  +  +L ++L L+       V   +  +      VV
Sbjct: 30  VVQVLLKLAYPALILCAWKWDTPRYVGCMLFAILWLQRWAGSGPVATSLRRLSSIDWTVV 89

Query: 61  GIFLTAGSYLAKQTAWLLY--YPVVINLSMLALFAYSLKHGPTMIERLARLKEPDLPDEA 118
           G+   A + +    + LL   YP ++NL +L  F  +L  GP+MIE+ ARL  P+LP  A
Sbjct: 90  GLLSCASAAIVLTNSELLLRLYPSLVNLGLLIAFGATLVRGPSMIEKFARLGNPNLPPGA 149

Query: 119 IPYLRKVTQIWCGLFVFNGAMALYTASATSLATWTLYNGFIAYLLIGTLLGGEWLYR 175
           + +  +VTQ+WC  F  NG  + YTA   S A+W+LYNG IAY+LIG LL  E ++R
Sbjct: 150 VRHTLRVTQVWCAFFALNGVFSAYTAVYWSRASWSLYNGAIAYVLIGVLLVAEVIWR 206