Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella loihica PV-4

Subject, 609 a.a., DNA helicase RecQ from Rhodanobacter denitrificans MT42

 Score =  554 bits (1427), Expect = e-162
 Identities = 293/603 (48%), Positives = 394/603 (65%), Gaps = 13/603 (2%)

Query: 15  PLAACLQTVFGYRTFRTGQREVIEQVCGGQDALVIMPTGGGKSLCYQLPALVLHGLTLVV 74
           P    LQ+VFGY +FR  Q+ V+E +  G DALV+MPTGGGKSLCYQ+PAL+  G  +VV
Sbjct: 4   PALDLLQSVFGYPSFRGQQQAVVEHLGEGGDALVLMPTGGGKSLCYQIPALLRQGTGIVV 63

Query: 75  SPLISLMKDQVDSLKQMGVAAAYLNSSQSREEALTIYRQLHNGELKLLYVSPERLLTDSF 134
           SPLI+LM+DQVD+L++ GVAAAYLNSS   E    + RQL  GEL LLYV+PERLLT  F
Sbjct: 64  SPLIALMQDQVDALREAGVAAAYLNSSLGAEAQREVERQLLAGELNLLYVAPERLLTSRF 123

Query: 135 IERLHNLPLSLFAIDEAHCISQWGHDFRPEYAALGQLKQLFPRVPMMALTATADKATRED 194
           +  L ++ ++LFAIDEAHC+SQWGHDFRPEY  L  L Q FP+VP +ALTATAD  TRE+
Sbjct: 124 LGLLESIEVALFAIDEAHCVSQWGHDFRPEYRELAILHQRFPQVPRIALTATADPRTREE 183

Query: 195 ICQRLGIA-PFELLTSFDRPNIRYTVAEKLNAANQLRQFIQAQNGNSGIIYCSSRRRVDE 253
           I +RL +    + ++SFDRPNI Y V  + NA  QL +F+Q   G SGI+YC SRR+VD+
Sbjct: 184 IVERLSLQHARQFVSSFDRPNIGYRVGLRHNAKRQLGEFLQGHQGESGIVYCLSRRKVDD 243

Query: 254 VAERLRMQGYHADAYHAGKTQEERADIQERFLKDQLDIVVATVAFGMGINKSNVRFVVHY 313
            A  L   G  A  YHAG     RA  Q+RFL++   ++VATVAFGMGI+K +VRFV H 
Sbjct: 244 TAAWLAESGVEALPYHAGLDAATRAKNQQRFLREDGVVMVATVAFGMGIDKPDVRFVAHL 303

Query: 314 DIPKSVEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQQEPGPQ-QQVEYHKLNT 372
           D+P+S+E YYQETGRAGRDGL AEA+M++  +D+  +  +I Q E   + ++VE  KL +
Sbjct: 304 DLPRSIEGYYQETGRAGRDGLPAEAWMIYGLSDVVTMSQMIAQSESADERKRVERQKLES 363

Query: 373 MAAFAEAQTCRRQVLLHYFDESASEPCGNCDICLDPPKRYDGVEDAQKVLSCIFRLQQKF 432
           + A+AEA  CRRQ+LL  F E    PCG+CD CL PPK +D    AQK LS ++R  Q++
Sbjct: 364 LLAYAEATGCRRQLLLGAFGEVYPGPCGHCDNCLAPPKTWDATVPAQKALSAVYRTGQRY 423

Query: 433 GVNHLIEVLRGSKAASVVDRGHDKLSTWGIGKEKSHEFWLSIIRQIIHLGFASQDITRGS 492
           G  H+I+VLRG +   V+   H +LST+G+G +   + W S+ RQ++  G    D     
Sbjct: 424 GSGHVIDVLRGEETERVLALDHHRLSTFGVGADLDEKQWRSVFRQLLAAGLLEADAEGYG 483

Query: 493 AIKLNPQARAVLKGELPLQLAEPRISITTHVKRRSSSRAPIN-----------YDRKLFA 541
            ++L   +R+VL G   L+L E         +RR S     +           Y+++L+ 
Sbjct: 484 TLRLTAASRSVLSGGRQLKLREDARPERASRRRRDSKLVTSDKGSGGSLGIEAYEQELWD 543

Query: 542 RLKQLRRSLAEELDVPPYLVFNDATLAEMAAMLPTSPGEMLAVNGVGETKLNRFGGEFLD 601
            L+ LR  LA++  VPPY+VF+DATL  M   +P +  E+  ++GVGE KL R+G +FL 
Sbjct: 544 ALRALRTQLAKQQGVPPYVVFHDATLLAMLRAMPANEDELATISGVGEAKLKRYGADFLA 603

Query: 602 EIN 604
            IN
Sbjct: 604 VIN 606