Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella loihica PV-4

Subject, 610 a.a., ATP-dependent DNA helicase RecQ from Rahnella sp. WP5

 Score =  687 bits (1773), Expect = 0.0
 Identities = 340/590 (57%), Positives = 440/590 (74%), Gaps = 3/590 (0%)

Query: 20  LQTVFGYRTFRTGQREVIEQVCGGQDALVIMPTGGGKSLCYQLPALVLHGLTLVVSPLIS 79
           L+  FGY+ FR GQ+ +I     G+D LV+MPTGGGKSLCYQ+PALV+ GLTLVVSPLIS
Sbjct: 17  LRDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLIS 76

Query: 80  LMKDQVDSLKQMGVAAAYLNSSQSREEALTIYRQLHNGELKLLYVSPERLLTDSFIERLH 139
           LMKDQVD L   GV A  LNS+Q+RE+ L +      G +K+LY++PERL+   F+E+L 
Sbjct: 77  LMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRAGRIKMLYIAPERLMMGDFLEQLQ 136

Query: 140 NLPLSLFAIDEAHCISQWGHDFRPEYAALGQLKQLFPRVPMMALTATADKATREDICQRL 199
               ++ A+DEAHCISQWGHDFRPEY ALGQLK  +P++P++ALTATAD+ATR DI + L
Sbjct: 137 QWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATADEATRNDIVRLL 196

Query: 200 GIA-PFELLTSFDRPNIRYTVAEKLNAANQLRQFIQAQNGNSGIIYCSSRRRVDEVAERL 258
            +  P   ++SFDRPNIRYT+ EK    +QL +F+Q Q G SGIIYC+SR +V++ A RL
Sbjct: 197 ELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGIIYCNSRAKVEDTAARL 256

Query: 259 RMQGYHADAYHAGKTQEERADIQERFLKDQLDIVVATVAFGMGINKSNVRFVVHYDIPKS 318
           + +G    AYHAG   + RA +QE F +D L IVVATVAFGMGINK NVRFVVH+DIP++
Sbjct: 257 QSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRT 316

Query: 319 VEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQQEPGPQQQVEYHKLNTMAAFAE 378
           +E+YYQETGRAGRDGL AEA +L+DPAD+  +R  +E++  G QQ VE HKLN M AFAE
Sbjct: 317 IESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQQDVERHKLNAMNAFAE 376

Query: 379 AQTCRRQVLLHYFDESASEPCGNCDICLDPPKRYDGVEDAQKVLSCIFRLQQKFGVNHLI 438
           AQTCRR VLL+YF E     CGNCD+CLDPPKRYDG+ DAQK LS + R+ Q+FG+ +++
Sbjct: 377 AQTCRRLVLLNYFGEGKQNACGNCDVCLDPPKRYDGLLDAQKALSVVARVGQRFGLGYVV 436

Query: 439 EVLRGSKAASVVDRGHDKLSTWGIGKEKSHEFWLSIIRQIIHLGFASQDITRGSAIKLNP 498
           EVLRGS    + + GHDKL+ +GIGKE S+E W S++RQ+IHLG  +Q+I   SA++L  
Sbjct: 437 EVLRGSNNQRIREYGHDKLTVYGIGKEHSNEHWTSVVRQLIHLGLITQNIAMHSALQLTE 496

Query: 499 QARAVLKGELPLQLAEPRISITTHVKRRSSSRA-PINYDRKLFARLKQLRRSLAEELDVP 557
            AR VL+GE+PLQLA PRI  T  +K  +S +    NYDRKLFA+L++LR+SLA++ +VP
Sbjct: 497 SARPVLRGEIPLQLAVPRIQ-TLKIKSSASQKTYGGNYDRKLFAKLRKLRKSLADDNNVP 555

Query: 558 PYLVFNDATLAEMAAMLPTSPGEMLAVNGVGETKLNRFGGEFLDEINDYL 607
           PY+VFND TL EMA  LP S  ++L + GVG+ KL +FG  F+  I D++
Sbjct: 556 PYVVFNDTTLLEMAEHLPVSASDLLDITGVGQRKLEKFGRPFMAMIRDHI 605