Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella loihica PV-4

Subject, 609 a.a., DNA helicase RecQ from Parabacteroides merdae CL09T00C40

 Score =  474 bits (1219), Expect = e-138
 Identities = 251/597 (42%), Positives = 366/597 (61%), Gaps = 16/597 (2%)

Query: 16  LAACLQTVFGYRTFRTGQREVIEQVCGGQDALVIMPTGGGKSLCYQLPALVLHGLTLVVS 75
           L + L+  FGY +FR  Q E+I++    +D+LV+MPTGGGKS+C+QLPA+ + G  +VVS
Sbjct: 4   LLSLLKRFFGYTSFRPLQAEIIQRTLQKEDSLVLMPTGGGKSICFQLPAIYMPGTAIVVS 63

Query: 76  PLISLMKDQVDSLKQMGVAAAYLNSSQSREEALTIYRQLHNGELKLLYVSPERLLTDSFI 135
           PLI+LMKDQV+ L   G+ AA LNS    EE   + +    G++KLLY+SPE ++++   
Sbjct: 64  PLIALMKDQVEGLIANGIPAATLNSMMPEEERHRVRQLCIQGKVKLLYISPEGIISELHW 123

Query: 136 ERLHNLPLSLFAIDEAHCISQWGHDFRPEYAALGQLKQLFPRVPMMALTATADKATREDI 195
             L  + +SL AIDEAHCIS WGHDFRPEY  L  LK+ FP+VP++ALTATADK TR DI
Sbjct: 124 -LLPRIDISLIAIDEAHCISHWGHDFRPEYTQLSVLKENFPKVPIIALTATADKITRTDI 182

Query: 196 CQRLGIA-PFELLTSFDRPNIRYTVAEKLNAANQLR---QFIQAQNGNSGIIYCSSRRRV 251
             +L +  P   ++SFDRPN+  T+   L+   ++     FI   +  SGIIYC SR   
Sbjct: 183 LNQLKLRDPKTFISSFDRPNLSLTIRRGLSKKEKIAAIVHFINRHHRQSGIIYCMSRNST 242

Query: 252 DEVAERLRMQGYHADAYHAGKTQEERADIQERFLKDQLDIVVATVAFGMGINKSNVRFVV 311
           + + E L      A AYHAG + ++R   Q+ F+ D++++V ATVAFGMGI+KSNVR+V+
Sbjct: 243 ESLVEELSEYSIRAVAYHAGLSSDKREKAQDDFINDRVNVVCATVAFGMGIDKSNVRWVI 302

Query: 312 HYDIPKSVEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQQEPGPQQQVEYHKLN 371
           HY++P S+E YYQE GRAGRDG+ ++  + +   DI  +R   E+     Q+ V   KLN
Sbjct: 303 HYNMPASIENYYQEIGRAGRDGMKSDTLLFYSVGDILLLRRFAEESG---QKDVSLQKLN 359

Query: 372 TMAAFAEAQTCRRQVLLHYFDESASEPCGNCDICLDPPKRYDGVEDAQKVLSCIFRLQQK 431
            M  + EA  CRR++LL YF E   + CGNCD+C +PP+R+DG    QK LS IFR  Q 
Sbjct: 360 RMRRYCEADICRRRILLSYFGEETDKDCGNCDVCKNPPQRFDGSILVQKALSGIFRTGQT 419

Query: 432 FGVNHLIEVLRGSKAASVVDRGHDKLSTWGIGKEKSHEFWLSIIRQIIHLGFASQDITRG 491
             ++ LI++LRG++   + ++G+DKL T+G+GK+ S++ W   + Q++ LG+   D    
Sbjct: 420 ANMHLLIDILRGAEKDELKEKGYDKLKTYGVGKDLSYKEWKEYLYQMLQLGYIEIDYMSA 479

Query: 492 SAIKLNPQARAVLKGELP--LQLAEPRISITTHVKRRSSSRAPI------NYDRKLFARL 543
             +K+ P  R VL GE    + + +         K+      PI      + D  L   L
Sbjct: 480 GHLKVTPLGRKVLFGEQQALMTIYQKIKDFALPTKKGGYKYRPIRPIESTSVDETLLDSL 539

Query: 544 KQLRRSLAEELDVPPYLVFNDATLAEMAAMLPTSPGEMLAVNGVGETKLNRFGGEFL 600
           +QLR+ +AE    P Y++F+D  L +M    P +  E   + GVG+ KL+++G  F+
Sbjct: 540 QQLRKQIAEREHTPAYILFSDDALEDMVRKKPVTLDEFSEIRGVGQLKLDKYGKVFV 596