Pairwise Alignments

Query, 484 a.a., UDP-N-acetylmuramate--alanine ligase (RefSeq) from Shewanella loihica PV-4

Subject, 488 a.a., UDP-N-acetylmuramate--alanine ligase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  791 bits (2043), Expect = 0.0
 Identities = 401/481 (83%), Positives = 435/481 (90%), Gaps = 1/481 (0%)

Query: 1   MIKTEEKYAQLRTIIPEMRRVKRIHFVGIGGAGMGGIAEVLVNEGYRLSGSDIAENAVTA 60
           M KTE +Y QLR++IPEMRR+KRIHFVGIGGAGMGGIAEVLVNEGY +SGSDIA+NAVT 
Sbjct: 1   MTKTE-RYLQLRSMIPEMRRIKRIHFVGIGGAGMGGIAEVLVNEGYVVSGSDIAQNAVTD 59

Query: 61  RLKRLGAAIFIGHSADQVEGADVVVVSTAIDASNPEILAAQERRIPIVRRAEMLAELMRY 120
           RL  LGA I IGH AD V+ ADVVVVSTAI+  NPEI+AA+E RIPIVRRAEMLAELMRY
Sbjct: 60  RLCLLGAKIHIGHGADNVQQADVVVVSTAINPQNPEIIAAKELRIPIVRRAEMLAELMRY 119

Query: 121 RHGVAVAGTHGKTTTTSLIASVYGQAERDPTFVIGGLLNSAGTNARLGKSRYLIAEADES 180
           RHGVA+AGTHGKTTTTSLIAS+YGQA RDPTFVIGGLLNSAGTNARLG SRYLIAEADES
Sbjct: 120 RHGVAIAGTHGKTTTTSLIASLYGQAGRDPTFVIGGLLNSAGTNARLGTSRYLIAEADES 179

Query: 181 DASFLHLQPMVSVVTNIEADHMDTYEGDFEKLKSTFVDFLHNLPFYGVAVACIDDPVVRE 240
           DASFLHLQPMVSVVTNIEADHMDTY GDFEKLKSTFVDFLHNLPFYGVAV CIDDPVVRE
Sbjct: 180 DASFLHLQPMVSVVTNIEADHMDTYGGDFEKLKSTFVDFLHNLPFYGVAVVCIDDPVVRE 239

Query: 241 ILPRIGRKVVTYGFSEDADVQALNFEQQGYSSRFTVRREGMADLDLRVNLPGRHNVLNAL 300
           I+PRI R +VTYGF +DADVQALNF QQG+  RFTVRR+G  DLDL +NLPG+HNVLNAL
Sbjct: 240 IMPRISRHIVTYGFRDDADVQALNFSQQGHQCRFTVRRKGKEDLDLLLNLPGQHNVLNAL 299

Query: 301 AAIAVATEDEIEDEAIIRALDEFQGIGRRFQQLGEFTTTAGEVMLVDDYGHHPSEVAATI 360
           AAIAVATEDEI+D AII+AL EFQGIGRRFQ LG+F T  GEVMLVDDYGHHPSEVAATI
Sbjct: 300 AAIAVATEDEIDDSAIIQALAEFQGIGRRFQHLGKFATPKGEVMLVDDYGHHPSEVAATI 359

Query: 361 KAARSGWPDKRLVMIYQPHRYSRTRDLYDDFVEVLAQVDCLLLLDVYSAGEAPVPGADSR 420
           KAAR+GWP+KRLVM YQPHRY+RTRDLY+DF+EVL+QVDCLLLLDVYSAGEAP+PGAD R
Sbjct: 360 KAARAGWPEKRLVMAYQPHRYTRTRDLYEDFIEVLSQVDCLLLLDVYSAGEAPIPGADGR 419

Query: 421 ALCRSIRQRGQLDPIFVAEPEQLQTILPGVLQGGDLLLTQGAGNIGALSRQLADAGLQFE 480
           ALCRSIR RGQLDPIF+A PEQL  +LP VLQ GDLLLTQGAGNIGALSR+LA + L F 
Sbjct: 420 ALCRSIRLRGQLDPIFIASPEQLAEVLPDVLQEGDLLLTQGAGNIGALSRKLAASELGFS 479

Query: 481 S 481
           +
Sbjct: 480 T 480