Pairwise Alignments

Query, 888 a.a., pyruvate dehydrogenase subunit E1 (RefSeq) from Shewanella loihica PV-4

Subject, 275 a.a., transketolase from Methanococcus maripaludis S2

 Score = 62.4 bits (150), Expect = 3e-14
 Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 34/273 (12%)

Query: 85  IRWNALAMVLRGSKKDLELGGHISSFASSATIYDVCFNHFFRAPNEKDGGDLVYFQGHIA 144
           +R+N + M+  G  +    GG +S+    +++Y    N+  + P +      +  +GH  
Sbjct: 19  LRYNIVKMI--GLAESGHPGGSLSAIDIVSSLYYNIMNYDPKDPKQDSRDRFILSKGHAC 76

Query: 145 PGIYARSFLEGRLTEDQLANFRQEVDGKGLSSYPHPKLMPDYWQFPTVSMGLGPIQAIYQ 204
           P +Y      G   E++L + RQ     G     HP +     +  T S+G G   ++  
Sbjct: 77  PALYVTLADLGYFKEEELWSLRQ----LGALLQGHPTIEIPGIEVNTGSLGQGFSSSVGV 132

Query: 205 A---RFLKYLTDRGLKDCSEQTVYCFLGDGECDEPETLGAIGLAAREELDNLVFIVNCNL 261
           A   +  KY          E  V+  LGDGEC E +   A   AA  +LDNL+  V+ N 
Sbjct: 133 AIGCKLNKY----------ENNVFVLLGDGECQEGQVWEAAMAAAHYKLDNLIGFVDRNK 182

Query: 262 QRLDGPVRGNGKIIQELEGEFRGAGWEVAKVIWGRYWD-----PLLARDTSGKLLQLMEE 316
            ++DG    +   + +L+ +F   G++V ++    + +      L     +GK   ++  
Sbjct: 183 LQIDGCTE-DVMCLMDLKAKFSAFGFDVFEIDGHNFEEIVKTAELAKTMKNGKPKMIIAN 241

Query: 317 TVDGEYQNCKAKGGAYTREH--FFGKYPETAEM 347
           TV       K KG ++   +  F GK P   E+
Sbjct: 242 TV-------KGKGVSFMENNVGFHGKAPNKEEL 267



 Score = 28.1 bits (61), Expect = 7e-04
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 363 GHDPVKIYAALQHAKNTK-GRPTVILAKTVKGYGL 396
           GH+  +I    + AK  K G+P +I+A TVKG G+
Sbjct: 214 GHNFEEIVKTAELAKTMKNGKPKMIIANTVKGKGV 248