Pairwise Alignments

Query, 493 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

Subject, 635 a.a., two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 91.3 bits (225), Expect = 9e-23
 Identities = 66/250 (26%), Positives = 124/250 (49%), Gaps = 21/250 (8%)

Query: 245 RLLEEVAQKQRQVTAQQAAKQEFLLHLSHDLKTPLTTLLGYLDTWLLSPADARDDSLLQY 304
           R  EE+ + +R+       K  FL ++SH+++TPL  ++G+ +   L+  +      L+ 
Sbjct: 263 RRSEELIEAKRRAEDADRMKSVFLANMSHEIRTPLNAIVGFSEIMALTENEEEKHEYLEI 322

Query: 305 AAASGQKLQQLLAQMLELAALENGQIKANMRRVSLQSILDELNQTFTPKAKRAEVSLRLG 364
              +   L QL+  +L+L+ +E+G+ + + ++V +  ++DE+ +    K K   V L++ 
Sbjct: 323 IQKNSNLLLQLINDILDLSRIESGKSEMHFQQVEIAGLVDEVEKVHQLKMK-LNVDLKVV 381

Query: 365 QGESEGESEFLYTDPQLMSRVLNNLLDNALRHTPPGGEIAVYPQTLASGSYLVIQDSGSG 424
           + + E    +  TD   + +VL N L NA+++T   G I +  +       L + D+G G
Sbjct: 382 RPQGE---FWTSTDRNRVMQVLFNFLSNAIKNTET-GSITLGLKQEGDWLKLFVSDTGCG 437

Query: 425 MQPEAIAALQHTPSPSQPELYYCRGETLPQL----GVGLAIVRQLLARLGCRIEVQSATD 480
           +  E +  +            + R E L       G+GL+I + ++ RLG RIEV S   
Sbjct: 438 IPEEKLPQI------------FTRFEKLNDFVQGTGLGLSICKSIVERLGGRIEVSSELG 485

Query: 481 RGSRFMIALP 490
           +GS F + LP
Sbjct: 486 QGSTFALYLP 495