Pairwise Alignments

Query, 308 a.a., transporter DMT superfamily protein (RefSeq) from Shewanella loihica PV-4

Subject, 295 a.a., Putative D-serine transporter (from data) from Pseudomonas fluorescens FW300-N2C3

 Score =  171 bits (433), Expect = 2e-47
 Identities = 94/287 (32%), Positives = 156/287 (54%), Gaps = 1/287 (0%)

Query: 10  KGNALAIVSFLLWGLLPLYYQFLPGADITEMLAIRLLCSVPFMLLVFLLLGKPLPSLALL 69
           +G  L + ++++WGL P+Y++ +      E++  R+L S  F   + L+   P      L
Sbjct: 8   RGYILGLSAYIIWGLFPIYFKAIASVPSVEIIIHRVLWSALFGAALLLVWKHP-GWWREL 66

Query: 70  RTNLPSVALCALASLIMCVSWYSFTWALTHGQVLAASLGFFINPLFAIGLGVLFLKDRLT 129
           R N   +A+ AL+  ++  +W ++ WA+ + ++L ASLG++INPL  + LG++ L +RL 
Sbjct: 67  RDNPQRLAILALSGTLIAANWLTYVWAVNNERMLEASLGYYINPLVNVLLGMVILGERLR 126

Query: 130 VAQKWAVLLGTLGIGYMVMAYAQLPWLALLMGSFFALYGLCKKFIRFDSLTSVTIEAALL 189
             Q  AV L  +G+   V     LPW++L++   F  YGL +K     +L  + +E  +L
Sbjct: 127 RMQWLAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLVVETWML 186

Query: 190 TPIAAGYLFWLSATGQSEALSSGTGTMLLYMGSAPVTLLPLIFFALAIRHTSLSMVGLLQ 249
            PIA  +L +      ++A    T      + + PVTL+PL+ F  A RH   + +G LQ
Sbjct: 187 VPIAIAWLLFNPTATSAQAAFWTTSEAWWLVAAGPVTLVPLVCFNAATRHLPYTTIGFLQ 246

Query: 250 YIEPTMHFLLAIFLFNETFDSVKAVSFALIWVGLLLCSLEALHGLWR 296
           YI PT+  LLA+ LF E   S   V+F  IW GL + S++A+  + R
Sbjct: 247 YIAPTLVLLLAVLLFGEHLSSSTLVAFLFIWAGLAVYSVDAVISMRR 293