Pairwise Alignments

Query, 308 a.a., transporter DMT superfamily protein (RefSeq) from Shewanella loihica PV-4

Subject, 296 a.a., EamA family transporter RarD from Escherichia coli Nissle 1917

 Score =  161 bits (408), Expect = 2e-44
 Identities = 93/283 (32%), Positives = 156/283 (55%), Gaps = 1/283 (0%)

Query: 10  KGNALAIVSFLLWGLLPLYYQFLPGADITEMLAIRLLCSVPFMLLVFLLLGKPLPSLALL 69
           +G  LA+ ++ +WG+ P Y++ +      E+L  R++ S  F ++V + + +    L  L
Sbjct: 8   QGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSF-FFMVVLMSICRQWSYLKTL 66

Query: 70  RTNLPSVALCALASLIMCVSWYSFTWALTHGQVLAASLGFFINPLFAIGLGVLFLKDRLT 129
                 + + A++++++  +W  F WA+ +  +L ASLG+FINPL  I LG++FL +R  
Sbjct: 67  IQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFR 126

Query: 130 VAQKWAVLLGTLGIGYMVMAYAQLPWLALLMGSFFALYGLCKKFIRFDSLTSVTIEAALL 189
             Q  AV+L   G+   +  +  LP +AL +   FA YGL +K I  ++ T + IE   L
Sbjct: 127 RMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWL 186

Query: 190 TPIAAGYLFWLSATGQSEALSSGTGTMLLYMGSAPVTLLPLIFFALAIRHTSLSMVGLLQ 249
            P+AA YLF ++ +  S    +     LL + +  VT +PL+ F  A     LS +G  Q
Sbjct: 187 LPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQ 246

Query: 250 YIEPTMHFLLAIFLFNETFDSVKAVSFALIWVGLLLCSLEALH 292
           YI PT+ FLLA+  + E   + K V+FA IWV L +  ++A++
Sbjct: 247 YIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIY 289