Pairwise Alignments

Query, 420 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

Subject, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score = 69.3 bits (168), Expect = 2e-16
 Identities = 80/287 (27%), Positives = 120/287 (41%), Gaps = 41/287 (14%)

Query: 151 LMLFALFGFA------ITLLTRRLIAPIRAISEQLED-SEGDQSFRVSKDATQEFHALTA 203
           L +F L GFA      I  L+RRL    R +     D + G+   R S  +++    L  
Sbjct: 142 LFVFMLGGFALYCMFLIWFLSRRL----RELERVTHDFANGNLQARASTKSSKSVGKLNH 197

Query: 204 SLNHYQQQIALLIRREQAFSRYASHELRTPLTIIQGASRLLEQEGKPEFMQRQRGRIAKA 263
           S N    +I+ LI   +A +   +H+LRTP+  IQ  + +L +       Q+Q   I + 
Sbjct: 198 SFNMMADKISHLILSNKALTNAIAHDLRTPIFRIQWQAEVLAESQLNAKQQQQVASIIED 257

Query: 264 ASNMQHIIDALLSLVKQEKGLSSPDLRPLQEKELKQILAEVEPLASQKQIQL-----GLT 318
              M+ ++D LL   K E   S    + L+  +      + +   S  QIQ       L 
Sbjct: 258 TEEMETMVDELLYYAKLEHPESDIQSQYLEVNQWLADFIDEQSHKSSLQIQYLPSLQPLM 317

Query: 319 LDATPQIAPSEAVLRMLLINLLNNAIN-ASDSGCIAISVDDEG--ISVKDQGRGM----- 370
           LDA PQ+      L   L+NL+ NA   A D   I  S  D    I++ D G G+     
Sbjct: 318 LDADPQL------LTRALVNLIRNAEKYAGDRLLIEASTVDAKLCIAIHDNGPGIEEQHW 371

Query: 371 -----------SSSDTRPQGHGLGLEIVEALCQRYQWRFSLSNCDKG 406
                      SS +    G GLGL IV+ +  R+Q   +L+    G
Sbjct: 372 PHIFDAFYSTDSSRNKAQSGFGLGLAIVKQIMARHQGEVTLTKSPLG 418