Pairwise Alignments

Query, 246 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) from Shewanella loihica PV-4

Subject, 519 a.a., RNA methyltransferase TrmH, group 3 from Synechococcus elongatus PCC 7942

 Score =  180 bits (457), Expect = 4e-50
 Identities = 95/242 (39%), Positives = 143/242 (59%), Gaps = 3/242 (1%)

Query: 5   DFTFGIHAVEALLKNSPERVIEMWVLQG-RDDQRLMPLIAMAAEYGVSVQQASRKALDDK 63
           +  +G HAV A L+ +   +  +WV    R +   + LI  A   G  V +   + +   
Sbjct: 242 ELIYGRHAVLAALQGN-RTLNRIWVTPRLRYESTFLELIDAAKAGGAVVDEVPVERIRQL 300

Query: 64  AGSSQHQGVLVRAKPAKQLNDNDLLALLDKTET-PFLLILDGVTDPHNLGACLRNADAAG 122
              + HQG+  +  P      +DL+A      T P +++ DG+TDPHNLGA +R A+A G
Sbjct: 301 TDGAVHQGIAAQVAPYPYQELSDLIAQAKAATTDPVIVVADGITDPHNLGAIIRTAEALG 360

Query: 123 VHGVIVPRDNSVGLTPTVSKVACGAAEVVPLFQVTNLARTMKALQEKGVWIVGAAGEAEH 182
            HG+++P+  +VG+T  V+KVA GA E  P+ +V NL R ++ L++ G WI GAAGEA+ 
Sbjct: 361 AHGLVIPQRRAVGVTAAVAKVAAGALESFPVARVVNLNRALEELKDAGFWIYGAAGEAKQ 420

Query: 183 DLYKADLKGPIAIAMGAEDKGLRRLTRESCDSLASIPMAGSVSSLNVSVATGICLFEAVR 242
            +++    GP+ + +G+ED+GL  LTRE CD L SIP+ G  +SLN SVA G+ L+E  R
Sbjct: 421 SIHETSFSGPVVLVVGSEDEGLSLLTRERCDHLISIPLRGKTNSLNASVAAGMVLYEVSR 480

Query: 243 QR 244
           QR
Sbjct: 481 QR 482