Pairwise Alignments

Query, 246 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) from Shewanella loihica PV-4

Subject, 348 a.a., RNA methyltransferase TrmH, group 3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  126 bits (316), Expect = 7e-34
 Identities = 79/233 (33%), Positives = 120/233 (51%), Gaps = 12/233 (5%)

Query: 8   FGIHAVEALLKNSPERVIEMWVLQGRDDQRLMPLIAMAAEYGVSVQQASRKALDDKAG-S 66
           FG HAVEA L+N   + + +  L G  +           + G +V+ A R+A++      
Sbjct: 119 FGRHAVEAALQNPERKALRLLALAGAAEG--------LPKGGPTVEPADREAIEAVVPPG 170

Query: 67  SQHQGVLVRAKPAKQLNDNDLLALLDKTETPFLLILDGVTDPHNLGACLRNADAAGVHGV 126
           + HQG+ ++  P  Q    ++  +   +    + ILD V+DPHN+GA LR+A A G+  V
Sbjct: 171 AVHQGLALKVAPLSQPTVEEIARIPGPS---VVAILDQVSDPHNIGAVLRSAAAFGIRAV 227

Query: 127 IVPRDNSVGLTPTVSKVACGAAEVVPLFQVTNLARTMKALQEKGVWIVGAAGEAEHDLYK 186
           +V   +S   T T++K A G  E VPL +  NL++ +   +E G W  G    AE  L +
Sbjct: 228 VVQDRHSPEETGTLAKSASGTLERVPLVRAINLSQALDTFKEHGFWCAGLDASAETTLAE 287

Query: 187 ADLKGPIAIAMGAEDKGLRRLTRESCDSLASIPMAGSVSSLNVSVATGICLFE 239
           A L     + +G+E  GLRRL R+ CD L  + M   V SLNVS A  +  +E
Sbjct: 288 AALPERCVVVLGSEGAGLRRLVRDHCDLLVKLAMDSGVESLNVSNAAAVTFYE 340