Pairwise Alignments

Query, 468 a.a., replicative DNA helicase (RefSeq) from Shewanella loihica PV-4

Subject, 464 a.a., replicative DNA helicase from Pseudomonas stutzeri RCH2

 Score =  545 bits (1404), Expect = e-159
 Identities = 276/457 (60%), Positives = 354/457 (77%), Gaps = 6/457 (1%)

Query: 15  DIQIDALKMPPHSIEAEQSVLGGLMLDSDAWDKVAEAVVKDDFYSRSHKMIFTAMEALVA 74
           D++  ALK+PPHSIEAEQ+VLGGLMLD++AW++V + V   DFY   H++IF A+  L  
Sbjct: 11  DLETAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAIFTLAE 70

Query: 75  AGQPIDLITVSEQLELEDNLEDAGGFAYLGEIAKNTPSAGNILSYAAIVRERAVVREMIK 134
              P D++T+SEQL+ E +L   GG AYLGE+AKNTPS  NI +YA I+RERA +R++I 
Sbjct: 71  RNSPFDVVTLSEQLDKEGHLPQVGGLAYLGELAKNTPSVANIKAYAQIIRERATLRQLIG 130

Query: 135 VANEIADAGFNPEGRNSSELLDLAESKVFKIAEQRANANEGPEGIKTILEKTVDKIEELY 194
           ++NEIAD+ + P+GR   E+LD AE  +F+IAE R     GP GI  IL K +D+I+ L+
Sbjct: 131 ISNEIADSAYAPQGRTGEEILDEAERLIFQIAEARPKTG-GPVGINDILVKAIDRIDTLF 189

Query: 195 NNPHNGVTGVSSGFNDLDRMTAGFQSGDLIIVAARPSMGKTTFAMNLCEQAALHEDKPVL 254
            N    +TG+S+GF DLD  T G Q  DLIIVA RPSMGKTTFAMNL E A L  DK VL
Sbjct: 190 -NAGEAITGLSTGFTDLDEATNGLQPADLIIVAGRPSMGKTTFAMNLVENAVLRTDKAVL 248

Query: 255 IFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDDDWARVSSTMGIMLEQGKMYIDDGSG 314
           +FSLEMP++ I++RMLASLGR+DQTK+R G+L+DDDW R++S +  +L   K++IDD +G
Sbjct: 249 VFSLEMPADSIVIRMLASLGRIDQTKVRAGKLEDDDWPRLTSAVN-LLNDRKLFIDDTAG 307

Query: 315 LTPTEVRSRARRIAREYGGLSMIMIDYLQLMQVPALS-DNRTLEIAEISRSLKALAKELE 373
           ++P+E+R+R RR+ARE+G ++MIM+DYLQLMQ+P  S DNRT EI+EISRSLK LAKE  
Sbjct: 308 ISPSEMRARTRRLAREHGEIAMIMVDYLQLMQIPGSSGDNRTNEISEISRSLKGLAKEFN 367

Query: 374 IPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDDSEDKGTAEI 433
            PVIALSQLNRSLEQR +KRPVNSDLRESG+IEQDAD+IMF+YRDEVY+ ++E KG AEI
Sbjct: 368 CPVIALSQLNRSLEQRPNKRPVNSDLRESGAIEQDADIIMFVYRDEVYHPETEYKGVAEI 427

Query: 434 IIGKQRNGPIGRVRLTFQGQFSRFDNYA--GPQFEED 468
           IIGKQRNGPIG  RL F G++SRF+N A    QF++D
Sbjct: 428 IIGKQRNGPIGTTRLAFLGRYSRFENLAPGSYQFDDD 464