Pairwise Alignments

Query, 468 a.a., replicative DNA helicase (RefSeq) from Shewanella loihica PV-4

Subject, 454 a.a., primary replicative DNA helicase from Synechococcus elongatus PCC 7942

 Score =  351 bits (901), Expect = e-101
 Identities = 191/441 (43%), Positives = 286/441 (64%), Gaps = 10/441 (2%)

Query: 24  PPHSIEAEQSVLGGLMLDSDAWDKVAEAVVKDDFYSRSHKMIFTAMEALVAAGQPIDLIT 83
           PP ++EAE+++LG ++LD +A  ++A+ +  + FY+ +H+ I+ A   L + GQP DL +
Sbjct: 16  PPQNVEAEEAILGSILLDPEAIGRIADVLSPEAFYNSNHRDIYRAAVQLHSQGQPTDLTS 75

Query: 84  VSEQLELEDNLEDAGGFAYLGEIAKNTPSAGNILSYAAIVRERAVVREMIKVANEIADAG 143
           ++  L+    L+  GG + L ++     +  N+  YA +V ++ + R++I+  N +   G
Sbjct: 76  LTTSLQDAGQLDKVGGQSRLAKLVDRVVTTANVEQYAQLVIDKFLRRQLIQAGNSVIQLG 135

Query: 144 FNPEGRNSSELLDLAESKVFKIAEQRANANEGPEGIKTILEKTVDKIEELYNNPHNGVTG 203
           ++   +    +LD AE KVF I ++R      P     IL  T  +IE    +    ++G
Sbjct: 136 YDTT-KPLEAVLDQAEQKVFGITQERPTMGLLPAA--EILTSTFAEIES--RSMGTALSG 190

Query: 204 VSSGFNDLDRMTAGFQSGDLIIVAARPSMGKTTFAMNLCEQAALHEDKPVLIFSLEMPSE 263
           +S  + DLD MT GFQ  DLIIVA RP+MGKT+  +N+     +    PV +FSLEM  E
Sbjct: 191 ISCNYYDLDAMTQGFQRSDLIIVAGRPAMGKTSIVLNIARNITVAHKLPVCVFSLEMSKE 250

Query: 264 QIMMRMLASLGRVDQTKIRTGQLDDDDWARVSSTMGIM-LEQGKMYIDDGSGLTPTEVRS 322
           Q++ R+L+    ++ +++R+G++ D +W  +    GIM L Q  ++IDD  GLT +E+RS
Sbjct: 251 QLIYRLLSMEIGIESSRLRSGRIGDHEWEMLGK--GIMQLSQLPVFIDDTPGLTVSEMRS 308

Query: 323 RARRIAREYGG-LSMIMIDYLQLMQVPALSDNRTLEIAEISRSLKALAKELEIPVIALSQ 381
           +ARR+  E GG L +I+IDYLQLM+  + SDNR  EI++I+RSLK LA+EL +PVIALSQ
Sbjct: 309 KARRLMSEQGGQLGLILIDYLQLMEGSS-SDNRVQEISKITRSLKGLARELNVPVIALSQ 367

Query: 382 LNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDDSEDKGTAEIIIGKQRNG 441
           L+R +E R +KRP+ SDLRESGSIEQDADL+M IYRDE YN D+ D+G  EII+ K RNG
Sbjct: 368 LSRGVESRTNKRPMMSDLRESGSIEQDADLVMMIYRDEYYNPDTPDRGITEIIVAKHRNG 427

Query: 442 PIGRVRLTFQGQFSRFDNYAG 462
           P+G V+L F+ QF+RF N AG
Sbjct: 428 PVGTVKLLFEPQFTRFRNLAG 448