Pairwise Alignments

Query, 468 a.a., replicative DNA helicase (RefSeq) from Shewanella loihica PV-4

Subject, 507 a.a., replicative DNA helicase from Caulobacter crescentus NA1000

 Score =  301 bits (772), Expect = 3e-86
 Identities = 181/476 (38%), Positives = 279/476 (58%), Gaps = 39/476 (8%)

Query: 21  LKMPPHSIEAEQSVLGGLMLDSDAWDKVAEAVVKDDFYSRSHKMIFTAMEALVAAGQPID 80
           + + PH++EAEQ++LG L+ D+ A++++++ +    FY   H+ +F A+E  V  GQ  +
Sbjct: 21  INVAPHNMEAEQALLGVLLYDNAAYERLSDNLQARCFYEPFHQRLFQAIETHVRKGQLAE 80

Query: 81  LITVSEQLELEDNLEDAGGFAYLGEIAKNTPSAGNILSYAAIVRERAVVREMIKVANEIA 140
            I ++++ + +   E+ GG  YL ++    P A N+  YA ++ + ++ RE+I++  +IA
Sbjct: 81  PILLADEFKKDPAFEELGGLRYLADLVDRAPPAANVGDYARVIFDLSLRRELIRIGGDIA 140

Query: 141 DA--GFNPEGRNSSELLDLAESKVFKIAEQRANANEGPEGIKTILEKTVDKIEELYNNPH 198
            A  G N E RN+ + ++ AE  ++ +AE  A A+ G       L   V+   E Y+   
Sbjct: 141 TAAQGGNDEKRNARDQIEAAEQSLYSLAESGA-ASSGFVSFGDALRGAVEMTAEAYSRD- 198

Query: 199 NGVTGVSSGFNDLDRMTAGFQSGDLIIVAARPSMGKTTFAMNLCEQAA---LHEDKP--- 252
            G++GVS+   DLD+   G    DLII+A RPSMGKT  A N+    A    +E +P   
Sbjct: 199 GGMSGVSTDLMDLDQKIGGLHPSDLIILAGRPSMGKTALATNIAFNIAKKYAYEIQPDGT 258

Query: 253 --------VLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDDDWARVSSTMGIMLEQ 304
                   V  +SLEM +EQ+ +RMLA    V   ++R G++D  ++ RV     + L+ 
Sbjct: 259 KKTVQGGVVAFYSLEMSAEQLALRMLADASGVSGDRLRKGEIDASEFGRVRDA-AMELQN 317

Query: 305 GKMYIDDGSGLTPTEVRSRARRIAREYGGLSMIMIDYLQLMQVPAL--SDNRTLEIAEIS 362
             +YID   G++  ++ +RARR+ R+ G L +I++DYLQL+    L  + NR  E+++I+
Sbjct: 318 APLYIDATGGISIAKLTARARRLKRQVG-LDLIVVDYLQLVTGSDLGANANRVQEVSQIT 376

Query: 363 RSLKALAKELEIPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYN 422
             LKALAKEL +PVIALSQL+R +EQR DKRP  SDLRESGSIEQDAD++ F+YR+  Y 
Sbjct: 377 MGLKALAKELSVPVIALSQLSRQVEQRDDKRPQLSDLRESGSIEQDADMVWFVYREAYYV 436

Query: 423 DDSEDK-----------------GTAEIIIGKQRNGPIGRVRLTFQGQFSRFDNYA 461
             +E +                 G AE+II KQR+GPIG VRL+F    +RF N A
Sbjct: 437 GRAEPREGTPEHLTWQEEMDRLQGLAEVIIAKQRHGPIGTVRLSFNSDTTRFGNLA 492