Pairwise Alignments

Query, 468 a.a., replicative DNA helicase (RefSeq) from Shewanella loihica PV-4

Subject, 517 a.a., DNA helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  321 bits (823), Expect = 3e-92
 Identities = 177/447 (39%), Positives = 289/447 (64%), Gaps = 15/447 (3%)

Query: 22  KMPPHSIEAEQSVLGGLMLDSDAWDKVAEAVVKDDFYSRSHKMIFTAMEALVAAGQPIDL 81
           ++ P + E E++VLG LM++ DA+  V+E +  + FY   H++I+ A+  L    +P+D+
Sbjct: 24  RIQPQAPELEEAVLGALMIEKDAYSLVSEILRPESFYEHRHQLIYAAITDLAVNQKPVDI 83

Query: 82  ITVSEQLELEDNLEDAGGFAYLGEIAKNTPSAGNILSYAAIVRERAVVREMIKVANEIAD 141
           +TV EQL     LE+ GG  Y+ +++    S+ +I  +A I+ ++++ RE+I   + I  
Sbjct: 84  LTVKEQLSKRGELEEVGGPFYITQLSSKVASSAHIEYHARIIAQKSLARELITFTSNIQS 143

Query: 142 AGFNPEGRNSSELLDLAESKVFKIAEQRANANEGPEGIKTILEKTVDKIEELYNNPHNGV 201
             F+ E  +  +L+  AE K+F+I++Q  N  +    I  ++++    I++      +G+
Sbjct: 144 KAFD-ETLDVDDLMQEAEGKLFEISQQ--NMKKDYTQINPVIDEAYKLIQKAAART-DGL 199

Query: 202 TGVSSGFNDLDRMTAGFQSGDLIIVAARPSMGKTTFAMNLCEQAALHEDKPVLIFSLEMP 261
           +G+ SGF  LD+MT+G+Q+ DLII+AARP+MGKT F +++ +  A+    PV +FSLEM 
Sbjct: 200 SGLESGFTKLDKMTSGWQNSDLIIIAARPAMGKTAFVLSMAKNIAVDYRNPVALFSLEMS 259

Query: 262 SEQIMMRMLASLGRVDQTKIRTGQLDDDDWARVSSTMGIMLEQGKMYIDDGSGLTPTEVR 321
           + Q++ R++ ++  +   KI++GQL   +W ++   +  +L+   +Y+DD   L+  E+R
Sbjct: 260 NVQLVNRLITNVCEIPSEKIKSGQLASYEWQQLDYKLKDLLD-APLYVDDTPSLSVFELR 318

Query: 322 SRARRIAREYGGLSMIMIDYLQLMQVPALS-DNRTLEIAEISRSLKALAKELEIPVIALS 380
           ++ARR+ RE+ G+ +I+IDYLQLM    ++  +R  E++ ISRSLK LAKEL IP+IALS
Sbjct: 319 TKARRLVREH-GVRIIIIDYLQLMNASGMAFGSRQEEVSTISRSLKGLAKELNIPIIALS 377

Query: 381 QLNRSLEQRA---DKRPVNSDLRESGSIEQDADLIMFIYRDE---VYNDD--SEDKGTAE 432
           QLNR +E R     KRP  SDLRESG+IEQDAD++ FI+R E   +Y DD  ++ +G AE
Sbjct: 378 QLNRGVESREGIDGKRPQLSDLRESGAIEQDADMVCFIHRPEYYKIYQDDRGNDLRGMAE 437

Query: 433 IIIGKQRNGPIGRVRLTFQGQFSRFDN 459
           I+I K RNG +G V L F+G+F+RF N
Sbjct: 438 IVIAKHRNGAVGEVLLRFKGEFTRFSN 464