Pairwise Alignments

Query, 468 a.a., replicative DNA helicase (RefSeq) from Shewanella loihica PV-4

Subject, 486 a.a., replicative DNA helicase from Bifidobacterium breve UCC2003

 Score =  308 bits (789), Expect = 3e-88
 Identities = 163/438 (37%), Positives = 269/438 (61%), Gaps = 10/438 (2%)

Query: 22  KMPPHSIEAEQSVLGGLMLDSDAWDKVAEAVVKDDFYSRSHKMIFTAMEALVAAGQPIDL 81
           ++PPH  +AE +VLGG+++  DA  +V++ +   DFY   H+ I+ A+  L +A QP+D+
Sbjct: 44  RVPPHDDDAEMAVLGGMLMSKDAIGEVSQTIDVTDFYQPKHQTIYNAIIDLFSASQPVDV 103

Query: 82  ITVSEQLELEDNLEDAGGFAYLGEIAKNTPSAGNILSYAAIVRERAVVREMIKVANEIAD 141
           + V+ QL  + NLE  GG  YL  +  + P+A N + YA IV +RA++R +I    +IA 
Sbjct: 104 VLVANQLLADGNLEKVGGADYLHSLVASVPTAANAMYYAEIVHQRAILRNVIAAGTKIAQ 163

Query: 142 AGFNPEGRNSSELLDLAESKVFKIAEQRANANEGPEGIKTILEKTVDKIEELYNNPHNGV 201
            G++ EG  + ++++LA+S++++++       +    I  ++   +D++++L N      
Sbjct: 164 LGYSAEGSQAEDVVNLAQSEIYEMS--MGKVRQDYAAIGPVVHDALDQLDKLQNGLVQ-- 219

Query: 202 TGVSSGFNDLDRMTAGFQSGDLIIVAARPSMGKTTFAMNLCEQAALHEDKPVLIFSLEMP 261
            GV +GF D+D +T G Q G +I+VA RP+MGK+T  ++    AALH +   ++FSLEM 
Sbjct: 220 KGVPTGFRDIDDVTQGLQPGQMIVVAGRPAMGKSTLGIDFARAAALHHNMTSVVFSLEMS 279

Query: 262 SEQIMMRMLASLGRVDQTKI-RTGQLDDDDWARVSSTMGIMLEQGKMYIDDGSGLTPTEV 320
             ++  R++++   +    + R   +  + W  +++    M +    +IDD   ++  E+
Sbjct: 280 KVELAQRIISAETNIPMAALRRADDITPERWNTLNNFWNKM-QNAPFFIDDSPNMSLMEI 338

Query: 321 RSRARRIAREYGGLSMIMIDYLQLMQVPALSDNRTLEIAEISRSLKALAKELEIPVIALS 380
           R++ RR+ ++   L +++IDYLQLM      ++R  E++E SR+LK LAKELE+PV+ALS
Sbjct: 339 RAKCRRL-KQTNDLKLVVIDYLQLMTSGKAVESRQQEVSEFSRALKLLAKELEVPVVALS 397

Query: 381 QLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDDSEDK-GTAEIIIGKQR 439
           QLNR  E R DK+P  SDLRESGSIEQDAD++  ++R + Y  D ED+ G A+II+ K R
Sbjct: 398 QLNRGPEMRNDKKPQLSDLRESGSIEQDADVVFLVHRPDFY--DKEDRPGEADIIMAKHR 455

Query: 440 NGPIGRVRLTFQGQFSRF 457
           NGP     L F G  S+F
Sbjct: 456 NGPTETFHLAFLGATSKF 473