Pairwise Alignments

Query, 468 a.a., replicative DNA helicase (RefSeq) from Shewanella loihica PV-4

Subject, 461 a.a., DNA helicase from Burkholderia phytofirmans PsJN

 Score =  513 bits (1320), Expect = e-150
 Identities = 261/452 (57%), Positives = 343/452 (75%), Gaps = 2/452 (0%)

Query: 14  RDIQIDALKMPPHSIEAEQSVLGGLMLDSDAWDKVAEAVVKDDFYSRSHKMIFTAMEALV 73
           +D Q+++LK+PPHSIEAEQSVLGGL+LD+ AWD++A+ + + DFY   H++IF  +  L+
Sbjct: 6   KDPQLESLKVPPHSIEAEQSVLGGLLLDNAAWDRIADFLSQSDFYRYDHRIIFEHIGKLI 65

Query: 74  AAGQPIDLITVSEQLELEDNLEDAGGFAYLGEIAKNTPSAGNILSYAAIVRERAVVREMI 133
           AA +P D+ITV E L      E+ GG AYL  +A+NTPSA NI  YA IVR+RAV+R ++
Sbjct: 66  AATRPADVITVYEALGTSGKAEEVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLV 125

Query: 134 KVANEIADAGFNPEGRNSSELLDLAESKVFKIAEQRANANEGPEGIKTILEKTVDKIEEL 193
            VA+EI+   FNP+G+   +LLD AESKVF IAE  A   +G   I  +L + V++I+ L
Sbjct: 126 SVADEISADAFNPQGKEVRQLLDEAESKVFSIAEDGARGTQGFLEIGPLLTEVVERIDTL 185

Query: 194 YNNPH-NGVTGVSSGFNDLDRMTAGFQSGDLIIVAARPSMGKTTFAMNLCEQAALHEDKP 252
           Y+  + + VTG  +GF DLDRMT+G   G+LIIVA RPSMGKT F+MN+ E  A+    P
Sbjct: 186 YHTANPSDVTGTPTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLP 245

Query: 253 VLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDDDWARVSSTMGIMLEQGKMYIDDG 312
           V +FS+EMP  Q+ MRML S+GR+DQ ++RTG+L D+DW +++  +  M E  +++ID+ 
Sbjct: 246 VAVFSMEMPGSQLTMRMLGSVGRLDQHRMRTGRLTDEDWPKLTHAVQKMSE-AQIFIDET 304

Query: 313 SGLTPTEVRSRARRIAREYGGLSMIMIDYLQLMQVPALSDNRTLEIAEISRSLKALAKEL 372
            GL P E+RSRARR++R+ G L +I+IDYLQLM   +  +NR  EI+EISRSLK+LAKEL
Sbjct: 305 GGLNPMELRSRARRLSRQCGKLGLIIIDYLQLMSGSSSGENRATEISEISRSLKSLAKEL 364

Query: 373 EIPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDDSEDKGTAE 432
           ++PVIALSQLNR LEQR +KRP+ SDLRESG+IEQDAD+I+FIYRDEVYN DS DKGTAE
Sbjct: 365 DVPVIALSQLNRGLEQRPNKRPIMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAE 424

Query: 433 IIIGKQRNGPIGRVRLTFQGQFSRFDNYAGPQ 464
           IIIGKQRNGPIG VRLTF GQF++FDN+AG Q
Sbjct: 425 IIIGKQRNGPIGPVRLTFHGQFTKFDNFAGAQ 456