Pairwise Alignments

Query, 1076 a.a., Beta-galactosidase (RefSeq) from Shewanella loihica PV-4

Subject, 1103 a.a., beta-galactosidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  671 bits (1731), Expect = 0.0
 Identities = 384/1096 (35%), Positives = 573/1096 (52%), Gaps = 62/1096 (5%)

Query: 35   WQDHTLFEVNKLAPHASFFGYESEPLALLDEMDRSQLYLDLNGRWRFHLAKNPDATPKEF 94
            WQD  +  VNK  P  SF  Y++   AL  + ++S  Y  LNG W+F  A +    P   
Sbjct: 11   WQDVQVVSVNKEYPRTSFMTYDNRTDALTGKFEKSNYYQLLNGTWKFFFADSYKDLPANI 70

Query: 95   AAPEFDASHWGSIQVPGNFETQGYGHAIYLDERYPFDTKWPDAPS--DHNPTGLYRKTFT 152
              P      W  I+VPGN+E QGYG AIY +  Y F  + P  PS  + NP G+YR+   
Sbjct: 71   TDPSVSTDSWNDIKVPGNWEVQGYGVAIYTNHGYEFKPRNPQPPSLPEANPVGVYRRDID 130

Query: 153  LPAHWQQKQVFIHIGAARSALTLFVNGREVGYSQGAKTPAEFDITPYLQAGDNLVAMQLI 212
            +PA W+++ +++H+  A+S + +++NG+EVGYS+ +K PAEF I  Y++ G N++ +++ 
Sbjct: 131  IPADWKERDIYLHLAGAKSGVYVYINGQEVGYSEDSKNPAEFLINKYVKPGKNVLTLKIF 190

Query: 213  RWSDASYLESQDMLRMTGIEREVYLYATPKQRIEDIQVVTHLNEDLTRAKLAIRVDIASH 272
            RWS  SYLE QD  R++GIER+VYLY+ PK  ++D ++ + L++       A+ VD+ +H
Sbjct: 191  RWSTGSYLECQDFWRISGIERDVYLYSQPKAALKDFRITSTLDDSYKNGVFALNVDLRNH 250

Query: 273  QPGVRALELEARLLDPQGKPVAKANQR--LSLKGDAKPVFSQTLISPKLWNAEMPNLYRL 330
            +P    L L   LLD QGK VA   +   + +       F + L     W +E PNLY+L
Sbjct: 251  RPAATNLTLAYELLDAQGKVVATEEKTTYVPVNETRTLSFDKNLTDVHTWTSEHPNLYKL 310

Query: 331  ILTLKTEKGETLQVASQQIGVRKIAIE-------NGQ----LKVNNKAITIRGVDRHETD 379
            ++T+K E+G+  ++    +G R+I I+       NG+    L +N + + ++GV+ HE +
Sbjct: 311  VMTVK-EEGKVNEIIPFNVGFRRIEIKPIDQKAANGKPYVCLFINGQPLKLKGVNIHEHN 369

Query: 380  PQTGHVVSRETMELDIRLMKQNNINAVRSSHYPNHPYWLSLADRYGLYVIDEANIESHPL 439
            P+TGH V+ E M  D  LMKQ+N+N+VR  HYP    +  L D YGLYV DEANIESH +
Sbjct: 370  PETGHYVTEELMRRDFELMKQHNLNSVRLCHYPQDRRFYELCDEYGLYVYDEANIESHGM 429

Query: 440  AIDDKT--QLGNEMSWLPAHQARIERMVERDKNHPSVIIWSLGNEAGEGKLFERLYQWIK 497
              D +    LGN   WL  H  R   M ER+KN+PSV  WSLGNEAG G  F + Y W+K
Sbjct: 430  YYDLRKGGSLGNNPEWLKPHMDRTINMFERNKNYPSVTFWSLGNEAGNGYNFYQTYLWLK 489

Query: 498  RRDPN---RPVQYEPAGEAPYTDIVAPMYPSIERIREYAERASDRPLIMIEYAHAMGNSV 554
              D N   RPV YE A     TD+  P YP    + +  +  SDRP++  EYAHAMGNS 
Sbjct: 490  EADKNIMQRPVNYERAQWEWNTDMYVPQYPGAGWLEDIGKNGSDRPIVPSEYAHAMGNST 549

Query: 555  GNLQDYWDVIEAYPQLQGGFIWDWVDQALAFSNDLGQRYWAYGKDYHPDMPTDGNFLNNG 614
            GNL   W  I  YP LQGG+IWDWVDQ L   +  G+ YWAYG D+  + P+DGNFL NG
Sbjct: 550  GNLWGQWQAIYKYPNLQGGYIWDWVDQGLLQKDKNGREYWAYGGDFGVNAPSDGNFLCNG 609

Query: 615  LVDPDRNPHPHLSEVKKVYQPIKLRDFKVEGDKASVNLINGFDFASTSGLSLNWTLQKDG 674
            LV+PDR  HP ++EVK V+Q +      ++      N+ N F F +     +++++  +G
Sbjct: 610  LVNPDRGLHPAMAEVKYVHQNVGFD--AIDAASGKFNITNRFYFTNLKKYQIHYSVLANG 667

Query: 675  KIIASKRQAMPILSPGEQARVSLTLPGKQSLSAP-FEYHLLLEVLVDTPRPLLPSDLRIA 733
            K + S + ++ I     QA    T+P     + P  EY +   V+   P PL+P+   IA
Sbjct: 668  KTVKSGKVSLDI---APQASKEFTVPVNGLKARPGTEYFVNFSVIAVEPEPLIPAGYEIA 724

Query: 734  FEQFALPRFGTKAAYQVKKNQAKISEDSGSYRLTSGELSYEFDKRSGWLTQIYQEGEPQL 793
            ++QF LP    +  Y+      +         ++S ++++ F+K+SG +T    +G    
Sbjct: 725  YDQFRLPVEAERNTYKANGPALQTQTQGDELTVSSSKVNFVFNKKSGLVTSYKVDGTEYF 784

Query: 794  K--APLMANFWRAPTDNDLGNQMPDWAGAWQDAATELEVT---AIDADLALGLTISQTHA 848
            K    +  NFWRAP DND GN  P     W+ ++ +  VT       D A+ L  +   A
Sbjct: 785  KDGFGIQPNFWRAPNDNDYGNGAPKRLHVWKQSSKDFHVTDTKVSTEDKAVLLQATYLLA 844

Query: 849  EKGFSLRTRYSLDNAGRLMVDSQ---------------------FIPGNKPL------AD 881
                 + T Y +  +G + V+++                     F PG+          +
Sbjct: 845  AGNLYVVT-YKIYPSGIVHVNAKFTSTDMQAAETEVSEATRMATFTPGSDAARKAASKLE 903

Query: 882  LPRFGFSTRLGFEHRYLSYFGRGPEETYADRQSGNPLGWYALPIEQTYHRYPRPQETGQR 941
            +PR G   RL  +   + YFGRGPEE Y DR  G  +G Y    ++ Y  Y RPQE G  
Sbjct: 904  VPRIGVRFRLPAQMNNVQYFGRGPEENYIDRNHGTMVGIYQTTADKMYFNYVRPQENGHH 963

Query: 942  TQVRYAAVTDQRGQGWLAIANQAHAGEQDRKEADEVATLQTSLWPFAQADIDFRRGDAQD 1001
            T  R+  ++  +G G + +A+        R   ++  + +    P+   +         D
Sbjct: 964  TDTRWLNLSPDKGNGLVIVADSLIGFNALRNSVEDFDSEEALPHPYQWNNFSPEEAANHD 1023

Query: 1002 SASGLVAVTR-NHGAEIPLREFVTWNIDYRQMGVGGDTSWGRPVHGPYRIKA-EPIRFGF 1059
              +    + R +H  ++  R+FV   +D +Q GVGG  SWG      ++I A     +GF
Sbjct: 1024 EKAARNVLRRMHHVNDVTPRDFVEVCVDMKQQGVGGYDSWGARPEPFHQIPANREYNWGF 1083

Query: 1060 TLMPVSSDDDIRTLAR 1075
            TL+PV S       A+
Sbjct: 1084 TLVPVRSGSQATEAAK 1099