Pairwise Alignments

Query, 1076 a.a., Beta-galactosidase (RefSeq) from Shewanella loihica PV-4

Subject, 1342 a.a., beta-galactosidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  475 bits (1223), Expect = e-138
 Identities = 323/1025 (31%), Positives = 499/1025 (48%), Gaps = 115/1025 (11%)

Query: 35   WQDHTLFEVNKLAPHASFFGYESEPLALLDEMDRSQLYLDLNGRWRFHLAKNPDATPKEF 94
            W+      +NK  PHA FF ++    A     + S+ +  L+G W+FH A +PD+ PK+F
Sbjct: 40   WESPENLALNKEQPHAYFFPFQHLDNARKVLPENSKYWQSLDGDWKFHWAPDPDSRPKDF 99

Query: 95   AAPEFDASHWGSIQVPGNFETQG--------YGHAIYLDERYPFD------------TKW 134
               E+D S W +I VP ++   G        YG  IY+++   F              + 
Sbjct: 100  YQTEYDVSSWDAIPVPSSWNIYGIQKDGSQKYGTPIYVNQPVIFQHSVKVDDWRGGVMRT 159

Query: 135  PDAP----SDHNPTGLYRKTFTLPAHWQQKQVFIHIGAARSALTLFVNGREVGYSQGAKT 190
            P A      D N  G +R+ F +P  W  ++VFI      S   L++NG+ VG+S+ ++ 
Sbjct: 160  PPANWTTYKDRNEVGSFRRDFEIPQDWDGREVFISFDGVDSFFYLWINGQYVGFSKNSRN 219

Query: 191  PAEFDITPYLQAGDNLVAMQLIRWSDASYLESQDMLRMTGIEREVYLYATPKQRIEDIQV 250
             A F+ITPYLQ G N VA ++ R SD S+LE+QDM R+ GI R V LY+ PK    D+  
Sbjct: 220  TANFNITPYLQKGKNTVAAEVYRSSDGSFLEAQDMFRLPGIFRTVALYSVPKVHFRDLVA 279

Query: 251  VTHLNEDLTRAKLAIRVDIAS-HQPGVRALELEARLLDPQGKPVAKANQRLSLKGDAKPV 309
               L+   T   L +  +I +  +  ++  ++   L   +      +++   + G   PV
Sbjct: 280  TPDLDATYTDGSLTVNAEIRNLDKKAIKDYKVYYSLYANK----LYSDENTLVDGFLSPV 335

Query: 310  FS----------QTLI---SPKLWNAEMPNLYRLILTLKTEKGETLQVASQQIGVRKIAI 356
                        QT++   +P  W+AE P  Y L+  LK +K  T+++ S  +G RK+ I
Sbjct: 336  IDKIAPNETGSVQTVLKVKAPNKWSAEFPYRYTLVAELKDKKNRTVEMVSTIVGFRKVEI 395

Query: 357  ENGQLK------------VNNKAITIRGVDRHETDPQTGHVVSRETMELDIRLMKQNNIN 404
            ++                VN K + ++GV+RHE++P  GH ++RE ME +I LMK+ NIN
Sbjct: 396  KDTPASEDEFGLAGRYYYVNGKTVKLKGVNRHESNPGVGHAITREMMEKEIMLMKRANIN 455

Query: 405  AVRSSHYPNHPYWLSLADRYGLYVIDEANIESHPLAIDDKTQLGNEMSWLPAHQARIERM 464
             VR+SHYP+ PYW  L ++YG+Y+ DEANIESH         L + + W  AH AR+  M
Sbjct: 456  HVRNSHYPDDPYWYFLCNKYGIYLEDEANIESHEYYY-GAASLSHPVEWKNAHVARVMEM 514

Query: 465  VERDKNHPSVIIWSLGNEAGEGKLFERLYQWIKRRDPNRPVQYEPAGEAPYTDIVAPMYP 524
            V  + N+PS++IWSLGNEAG GK F   Y  +K+ D +RPVQYE   +    D+ +  YP
Sbjct: 515  VRANVNNPSIVIWSLGNEAGPGKNFVAAYDALKKFDTSRPVQYERNND--IVDMGSNQYP 572

Query: 525  SIERIREYAERASD--RPLIMIEYAHAMGNSVGNLQDYWDVIEAYPQLQGGFIWDWVDQA 582
            SI  +R   +   D   P  + EYAH+MGN+ GNL DYW+ +E+     GG IWDWVDQ+
Sbjct: 573  SIGWVRGAVQGKYDIKYPFHISEYAHSMGNACGNLIDYWEAMESTNFFCGGAIWDWVDQS 632

Query: 583  L-AFSNDLGQRYWAYGKDYHPDMPTDGNFLNNGLVDPDRNPHPHLSEVKKVYQPIKLRDF 641
            +  +    G RY AYG D+  D P DG F+ NG+V  D  P P   EVKKVYQ I ++  
Sbjct: 633  MYNYDPKTGVRYLAYGGDF-GDTPNDGQFVMNGIVFGDLEPKPQYYEVKKVYQHIGVK-- 689

Query: 642  KVEGDKASVNLINGFDFAS-TSGLSLNWTLQKDGKIIASKRQAMPILSPGEQARVSLTLP 700
             ++ +K    + N + F +      L ++L +DGK I + +     ++P ++A+++L   
Sbjct: 690  AIDTEKGVFEIFNKYYFKNLAEDYQLVYSLYEDGKPIMTGKPMDINIAPRQRAQITLPY- 748

Query: 701  GKQSLSAPFEYHLLLEVLVDTPRPLLPSDLRIAFEQFAL------PRFGTKAAYQVKKNQ 754
               SL    EY + L+ ++   RP       +A EQ  +      P      A   K + 
Sbjct: 749  DHASLKKDAEYFMKLQFILKDQRPWAAKGFPMAEEQILIKEATDRPSISEVTAGAAKLDG 808

Query: 755  AKISEDSGSYRLTSGELSYEFDKRSGWL--------TQIYQEGEPQLKAPLMANFWRAPT 806
              + +D+    +   +    FD ++G +        T I     P+L A       RA T
Sbjct: 809  FVLDKDTKRILIKGADFEAIFDPQTGSIYSLKYGNETVIADGNGPKLDA------LRAFT 862

Query: 807  DNDLGNQMPDWAGAWQD---AATELEV-TAIDADLALGLTISQTHAEKGFSLRTRYSLDN 862
            +ND     P +     +    ATE +V    +  L L  T+               S  N
Sbjct: 863  NNDNWFYAPWFEHGLHNLIHKATEYKVLNKGNGTLVLSFTVESQAPNAARIKGGTSSGKN 922

Query: 863  AGRLMVDSQF--------------------------IPGNKPLADLPRFGFSTRLGFEHR 896
            +   + D +F                          I  N+    LPR G+  ++  ++ 
Sbjct: 923  SIEELTDRKFGSNDFKFVTNQIWTVYPDGSIELQSSITSNRSSLVLPRLGYVMKVPQQYS 982

Query: 897  YLSYFGRGPEETYADRQSGNPLGWYALPIEQTYHRYPRPQETGQRTQVRYAAVTDQRGQG 956
              +Y+GRGP + YADR+SG  +  Y   +   +  +P+PQ+ G    VR+ A+T+Q G G
Sbjct: 983  NFTYYGRGPIDNYADRKSGQFIEQYTNSVAGEFVNFPKPQDMGNHEDVRWCALTNQAGNG 1042

Query: 957  WLAIA 961
             + +A
Sbjct: 1043 AVFVA 1047