Pairwise Alignments

Query, 1076 a.a., Beta-galactosidase (RefSeq) from Shewanella loihica PV-4

Subject, 1036 a.a., Beta-galactosidase (EC 3.2.1.23) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  652 bits (1681), Expect = 0.0
 Identities = 394/1079 (36%), Positives = 564/1079 (52%), Gaps = 74/1079 (6%)

Query: 9    QRLSYTLAFSLVFGLVVSNPALARDRWQDHTLFEVNKLAPHASFFGYESEPLALLDEMDR 68
            Q LS  LA     GL  +  A   + W+D  +  VN+ A H ++F Y S   A     + 
Sbjct: 4    QLLSCCLA---ALGLTTAIQAQNFNEWKDPEVNSVNRSAMHTNYFAYASADEAKAGSKED 60

Query: 69   SQLYLDLNGRWRFHLAKNPDATPKEFAAPEFDASHWGSIQVPGNFETQGYGHAIYLDERY 128
            SQ ++ LNG W+F+  +N DA P  F    F+   W +I+VP  +E  GYG  IY++  Y
Sbjct: 61   SQNFMTLNGLWKFNWVRNADARPTNFYQTSFNDKGWDNIKVPAVWELNGYGDPIYVNVGY 120

Query: 129  P----FDTKWPDAPSDHNPTGLYRKTFTLPAHWQQKQVFIHIGAARSALTLFVNGREVGY 184
                 F    P  P+++N  G YRK   LPA W+ K +F H G+  S + L+VNGR VGY
Sbjct: 121  AWRNQFQNNPPLVPTENNHVGSYRKEIVLPADWKGKDIFAHFGSVTSNMYLWVNGRYVGY 180

Query: 185  SQGAKTPAEFDITPYLQAGDNLVAMQLIRWSDASYLESQDMLRMTGIEREVYLYATPKQR 244
            S+ +K  AEFD+T YL+ G NL+A Q+ RW D SYLE QD  R +G+ R+ YLYA  K+R
Sbjct: 181  SEDSKLEAEFDLTNYLKPGKNLIAFQVFRWCDGSYLEDQDFFRYSGVGRDCYLYARDKKR 240

Query: 245  IEDIQVVTHLNEDLTRAKLAIRVDIASHQPGVRALELEARLLDPQGKPVAKANQRLSLKG 304
            I+DI+V   L+       L I +D+     G  AL+L     D QGK VA A+    LKG
Sbjct: 241  IQDIRVTPDLDSQYKDGTLNIAIDMKGS--GTVALDLT----DAQGKSVATAD----LKG 290

Query: 305  DAKPVFSQTLISPKLWNAEMPNLYRLILTLKTEKGETLQVASQQIGVRKIAIENGQLKVN 364
              K   +  + +P  W AE PNLY L  TLK     T +V   ++G RKI +  GQ+ VN
Sbjct: 291  SGKLNTTINVANPAKWTAETPNLYTLTATLKNGSTVT-EVIPVKVGFRKIELTGGQILVN 349

Query: 365  NKAITIRGVDRHETDPQTGHVVSRETMELDIRLMKQNNINAVRSSHYPNHPYWLSLADRY 424
             + +  +G DRHE DP  G+VVS E M  DI++MKQ NINAVR+ HYP+   W  L D+Y
Sbjct: 350  GQPVLFKGADRHEMDPDGGYVVSLERMIQDIKVMKQLNINAVRTCHYPDDNRWYDLCDQY 409

Query: 425  GLYVIDEANIESHPLAIDDKTQLGNEMSWLPAHQARIERMVERDKNHPSVIIWSLGNEAG 484
            GLYV+ EAN+ESH +   DK+   N + +  AH  R +R V+R  NHPS+I WSLGNEAG
Sbjct: 410  GLYVVAEANVESHGMGYGDKSLAKNPI-YAKAHMERNQRNVQRGYNHPSIIFWSLGNEAG 468

Query: 485  EGKLFERLYQWIKRRDPNRPVQYEPAGEAPYTDIVAPMYPSIERIREYAERASDRPLIMI 544
             G  FE  Y WIK  D  R VQYE AG + +TDI  PMY       +Y E   D+PLI  
Sbjct: 469  MGPNFEHCYTWIKNEDKTRAVQYEQAGTSEFTDIFCPMYYDYNNCIKYCEGNIDKPLIQC 528

Query: 545  EYAHAMGNSVGNLQDYWDVIEAYPQLQGGFIWDWVDQALAFSNDLGQRYWAYGKDYHPDM 604
            EYAHAMGNS G  ++YWD+   YP+ QGGFIWD+VDQ+  + N  G   + YG D++   
Sbjct: 529  EYAHAMGNSQGGFKEYWDITRKYPKYQGGFIWDFVDQSCHWKNKDGVAIYGYGGDFNKYD 588

Query: 605  PTDGNFLNNGLVDPDRNPHPHLSEVKKVYQPIKLRDFKVEGDKASVNLINGFDFASTSGL 664
             +D NF +NGL+ PDR P+PH  EV   YQ I       +  K  +N+ N   F   S  
Sbjct: 589  ASDNNFNDNGLISPDRVPNPHAYEVGYFYQNIWTT--PADLSKGEINIYNENFFRDLSAF 646

Query: 665  SLNWTLQKDGKIIASKRQAMPILSPGEQARVSLTLPGKQSLSAPFEYHLLLEVLVDTPRP 724
             L W L  +G+II +   +   ++P + A++ L    K   S   E  L +   +     
Sbjct: 647  YLEWQLLANGEIIQNGIVSDLNVAPQQTAKLQLPFDIKNICSCK-ELLLNVSYKLKAAET 705

Query: 725  LLPSDLRIAFEQFALPRFGTKAAYQVKKNQAKIS-------EDSGSYRLTSGE-LSYEFD 776
            LLP+   IA++Q ++  +         K  + I+       ++  +Y + SGE  + EF+
Sbjct: 706  LLPAGETIAYDQMSIRDYKAPELKLENKQSSNIAVVVPSFQDNDHNYLIVSGEDFTLEFN 765

Query: 777  KRSGWL-------TQIYQEGEPQLKAPLMANFWRAPTDNDLGNQMPDWAGAWQDAATELE 829
            K +G+L       TQ+ ++G     + L  NFWRAPTDND G  +    GAW++   EL+
Sbjct: 766  KHNGYLCRYDVSGTQLMEDG-----SALTPNFWRAPTDNDFGAGLQHRYGAWKN--PELK 818

Query: 830  VTAIDADLALGLTISQTHAEK---GFSLRTRYSLDNAGRLMVDSQF-IPGNKPLADLPRF 885
            +T++  D+     + +   +    G  L   Y+++N G + V  +     +K ++D+ RF
Sbjct: 819  LTSLKHDIENEQAVVRAEYDMKSIGGKLFLTYAINNKGAVKVTQKMEADKSKKVSDMFRF 878

Query: 886  GFSTRLGFEHRYLSYFGRGPEETYADRQSGNPLGWYALPIEQTYHRYPRPQETGQRTQVR 945
            G   R+      + Y+GRGP E Y+DR     +G Y   +E+ ++ Y RPQETG +T +R
Sbjct: 879  GMQLRMPVTFNEIEYYGRGPGENYSDRNHAARIGKYRQTVEEQFYPYIRPQETGTKTDIR 938

Query: 946  YAAVTDQRGQGWLAIANQAHAGEQDRKEADEVATLQTSLWPFAQADIDFRRGDAQDSASG 1005
            +  + +  G G   +A+                       PF+ + +++      D A  
Sbjct: 939  WWRLLNIGGNGLQFVADA----------------------PFSASALNYTIESLDDGA-- 974

Query: 1006 LVAVTRNHGAEIPLREFVTWNIDYRQMGVGGDTSWGRPVHGPYRIKAEPIRFGFTLMPV 1064
                 + H  E+    F  + ID  Q G+    SWG      YR+  +   F F + PV
Sbjct: 975  --GKDQRHSPEVEKANFTNFCIDKVQTGLACVNSWGAIALEKYRLPYQDYEFSFIMNPV 1031