Pairwise Alignments

Query, 1076 a.a., Beta-galactosidase (RefSeq) from Shewanella loihica PV-4

Subject, 1421 a.a., beta-galactosidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  557 bits (1435), Expect = e-162
 Identities = 353/1087 (32%), Positives = 552/1087 (50%), Gaps = 94/1087 (8%)

Query: 19   LVFGLVVSNPALARDRWQDHTLFEVNKLAPHASFFGYESEPLALLDEMDRSQLYLDLNGR 78
            L   L V+     +  W +  +  VNK         +  E  A+   ++ S  Y  LNG 
Sbjct: 14   LFMSLSVTAQTTDKPEWSNELVSGVNKEEAVQIAIPFTDEQQAMNLTIEESPYYKTLNGI 73

Query: 79   WRFHLAKNPDATPKEFAAPEFDASHWGSIQVPGNFETQGYGH------AIYLDERYPF-- 130
            W+FH   +P   P++F  PE+D S W +I+VP  ++ +   H       +Y +  YPF  
Sbjct: 74   WKFHWVADPKDRPQDFCKPEYDVSQWDNIKVPATWQIEAVRHNKNWDKPLYCNVIYPFCE 133

Query: 131  ----DTKWPDA----PSDH------NPTGLYRKTFTLPAHWQQKQVFIHIGAARSALTLF 176
                  +WP+     PS++      NP G YR+ F LP  W+ + +FI      +   ++
Sbjct: 134  WDWKKIQWPNVIQPRPSNYTFATMPNPVGSYRREFILPDSWKGRDIFIRFNGVEAGFYIW 193

Query: 177  VNGREVGYSQGAKTPAEFDITPYLQAGDNLVAMQLIRWSDASYLESQDMLRMTGIEREVY 236
            VNG++VGYS+ +  PAEF++TPYL+AG N++A+++ R++D S+LE QD  R +GI R+V+
Sbjct: 194  VNGKKVGYSEDSYLPAEFNLTPYLKAGKNVLAVEVYRFTDGSFLECQDFWRFSGIFRDVF 253

Query: 237  LYATPKQRIEDIQVVTHLNEDLTRAKLAIRVDIASHQPGVRALELEARLLDPQGKPVAKA 296
            L++ PK +I D    T L+++   A +++ +DI   +      E++ ++ D  GK +A  
Sbjct: 254  LWSAPKTQIRDFFFRTDLDKEYKNASVSLDIDITGKRSN---NEIQVKVTDQNGKEIATQ 310

Query: 297  NQRLSLKGDAKPVFSQTLISPKLWNAEMPNLYRLILTLKTEKGETLQVASQQIGVRKIAI 356
            N R ++ G  K  F   +++P  W AE PNLY L + LK +KG+T+ + S ++G RKI +
Sbjct: 311  NAR-AVTGTNKLQFE--VVNPLKWTAETPNLYNLTILLK-QKGKTVDIRSVKVGFRKIEL 366

Query: 357  -ENGQLKVNNKAITIRGVDRHETDPQTGHVVSRETMELDIRLMKQNNINAVRSSHYPNHP 415
             ++G+L +N K+   +GVDRH+   + G  VS+E ME D++LMK  NINAVR+SHYPN+P
Sbjct: 367  AQDGRLLINGKSTLFKGVDRHDHSSENGRTVSKEEMEKDVQLMKSLNINAVRTSHYPNNP 426

Query: 416  YWLSLADRYGLYVIDEANIESHPLAIDDKTQLGNEMSWLPAHQARIERMVERDKNHPSVI 475
            Y+  L DRYG+YV+ EAN+E H L       L +E SW+ A   R E MV R KNH S++
Sbjct: 427  YFYDLCDRYGIYVLSEANVECHGL-----MALSSEPSWVKAFTERSENMVRRYKNHASIV 481

Query: 476  IWSLGNEAGEGKLFERLYQWIKRRDPNRPVQYEPAGEAPYTDIVAPMYPSI--------E 527
            +WSLGNE+G G  F+   + +K+ D  RP  YE  G + Y D+ + MYP +        E
Sbjct: 482  MWSLGNESGNGINFKSAAEAVKKLDDTRPTHYE--GNSSYCDVTSSMYPDVQWLESVGKE 539

Query: 528  RIREYAERASDRPLIMIEYAHAMGNSVGNLQDYWDVIEAYPQLQGGFIWDWVDQALAFSN 587
            R++++    + +P ++ EYAHAMGNS+GN ++YW+  E YP L GGFIWDWVDQ++    
Sbjct: 540  RLQKFQNGETVKPHVVCEYAHAMGNSIGNFKEYWETYERYPALVGGFIWDWVDQSIKMPA 599

Query: 588  DLGQRYW-AYGKDYHPDMPTDGNFLNNGLVDPDRNPHPHLSEVKKVYQPIKLRDFKVEGD 646
              G  Y+ A+G D+  D P DGNF  NG++  DR       EVKK++QP+ +        
Sbjct: 600  PDGSGYYMAFGGDF-GDTPNDGNFCTNGVIFSDRTYSAKAYEVKKIHQPVWVEAM----G 654

Query: 647  KASVNLINGFDFASTSGLSLNWTLQKDGKIIASKRQAMPILSPGEQARVSLTLPGKQSLS 706
              +  L N    A    L   + +++DGK++ S    +  LS   Q    +T+   Q   
Sbjct: 655  NGTYKLTNKRFHAGLDDLYGRYEIEEDGKVVFSAN--LEELSLNAQDSKVITIADNQINK 712

Query: 707  AP-FEYHLLLEVLVDTPRPLLPSDLRIAFEQFALPRFGTKAAYQVKKNQAKISEDSGSYR 765
             P  EY +              +   +A EQF L     K  ++  +    + E   +Y 
Sbjct: 713  IPGAEYFIKFRFCQKQDTEWEKAGYEVASEQFKLSD-SAKPVFKAGEGSIDLIETDDAYL 771

Query: 766  LTSGELSYEFDKRSGWLTQIYQEGEPQLKAPLMANFWRAPTDNDLGNQMP-DW--AGAWQ 822
            +   +    F K+ G ++       P +   L  N +RAPTDND   Q+  DW   G +Q
Sbjct: 772  VKGSQFEASFSKQQGTISSYTLNELPMISKGLELNAFRAPTDND--KQVDGDWYQKGLYQ 829

Query: 823  DAATELEVTAIDADLALGLTISQTHAEK-GFSLRT--RYSLDNAGRLMVDSQFIPGNKPL 879
                         D  + L I   +  K GF  RT   Y++   G ++V+S  IP  K +
Sbjct: 830  MTLEPGHWNVRKEDNKVTLQIENLYRGKTGFDYRTNIEYTVAADGSILVNSTIIPSTKGV 889

Query: 880  ADLPRFGFSTRL--GFEHRYLSYFGRGPEETYADRQSGNPLGWYALPIEQTYHRYPRPQE 937
              +PR G+   L  GFE   + ++GRGP E Y DR+    +G Y   +   +  Y R QE
Sbjct: 890  I-IPRIGYRMELPEGFER--MRWYGRGPLENYVDRKDATYVGVYDELVSDQWVNYVRAQE 946

Query: 938  TGQRTQVRYAAVTDQRGQGWLAIANQAHAGEQDRKEADEVATLQTSLWPFAQADIDFRRG 997
             G R  +R+ ++T+  G G++ IA        D+  A  +                    
Sbjct: 947  MGNREDLRWISITNPDGIGFVFIAG-------DKMSASAL------------------HA 981

Query: 998  DAQDSASGLVAVTRNHGAEIPLREFVTWNIDYRQMGVGGDTSWGRPVHGPYRIKAEPIRF 1057
             AQD           H  E+P+R+     +D  Q  +G  +    P+   Y ++++P  F
Sbjct: 982  TAQDMVDPANHRRLLHKYEVPMRKETVLCLDANQRPLGNASCGPGPMQ-KYELRSQPTVF 1040

Query: 1058 GFTLMPV 1064
             F ++P+
Sbjct: 1041 SFIILPL 1047