Pairwise Alignments

Query, 1076 a.a., Beta-galactosidase (RefSeq) from Shewanella loihica PV-4

Subject, 1022 a.a., beta-galactosidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  654 bits (1687), Expect = 0.0
 Identities = 396/1052 (37%), Positives = 563/1052 (53%), Gaps = 82/1052 (7%)

Query: 35   WQDHTLFEVNKLAPHASFFGY-ESEPLALLDEMDRSQLYLDLNGRWRFHLAKNPDATPKE 93
            WQ      +NKLAPH   + Y ++  +      ++S  Y+ LNG+W+F+  KNPD  PK+
Sbjct: 30   WQSQYAVGLNKLAPHTYVWPYADASDIGKPGGYEQSPYYMSLNGKWKFNWVKNPDNRPKD 89

Query: 94   FAAPEFDASHWGSIQVPGNFETQGYGHAIYLDERYPFDTKW-------PDAPSDHNPTGL 146
            F  P +    W  I VPGN+E QGYG AIY++E Y FD K        P  P   N  G 
Sbjct: 90   FYQPSYYTGGWADINVPGNWERQGYGTAIYVNETYEFDDKMFNFKKNPPLVPFAENEVGS 149

Query: 147  YRKTFTLPAHWQQKQVFIHIGAARSALTLFVNGREVGYSQGAKTPAEFDITPYLQAGDNL 206
            YR+TF +PA W+ ++V +      S   ++VNG+ +GY+QG+KT AE+DIT  L  G+N+
Sbjct: 150  YRRTFKVPADWKGRRVVLCCEGVISFYYVWVNGKLLGYNQGSKTAAEWDITDVLSEGENV 209

Query: 207  VAMQLIRWSDASYLESQDMLRMTGIEREVYLYATPKQRIEDIQVVTHLNEDLTRAKLAIR 266
            VA+++ RWS  +YLE QDM R++GIER+VYLY+TPKQ I D +V   L+++  +  +   
Sbjct: 210  VALEVYRWSSGAYLECQDMWRLSGIERDVYLYSTPKQYIADYKVSASLDKEKYKEGI-FN 268

Query: 267  VDIASHQPGVRALELEARLLDPQGKPVAKANQRLSLKGDAKPV-FSQTLISP-KLWNAEM 324
            +++    P   A  +   L D  GK V +    +  +G +  + F +  I+  K WNAE 
Sbjct: 269  LEVTVEGPSATASSIAYTLKDASGKAVLQDAINIKSRGLSNFIAFDEKKIAEVKAWNAEH 328

Query: 325  PNLYRLILTLKTEKGETLQVASQQIGVRKIAIENGQLKVNNKAITIRGVDRHETDPQTGH 384
            PNLY L+L LK  +G+  ++   ++G R   I++G+  +N   + ++G +RHE   Q G 
Sbjct: 329  PNLYTLVLELKDAQGKVTELTGCEVGFRTSEIKDGRFCINGVPVLVKGTNRHE-HSQLGR 387

Query: 385  VVSRETMELDIRLMKQNNINAVRSSHYPNHPYWLSLADRYGLYVIDEANIESHPLAIDDK 444
             VS+E ME DIRLMKQ+NIN VR+SHYP HPYW  L DRYGLY+IDEANIESH +     
Sbjct: 388  TVSKELMEQDIRLMKQHNINMVRNSHYPTHPYWYQLCDRYGLYMIDEANIESHGMGY-GP 446

Query: 445  TQLGNEMSWLPAHQARIERMVERDKNHPSVIIWSLGNEAGEGKLFERLYQWIKRRDPNRP 504
              L  + +WL AH  R  RM ER KNHP+++IWS GNEAG G  FER Y W+K  +  RP
Sbjct: 447  ASLAKDSTWLTAHMDRTHRMYERSKNHPAIVIWSQGNEAGNGINFERTYDWLKSVEKGRP 506

Query: 505  VQYEPAGEAPYTDIVAPMYPSIERIREY-AERASDRPLIMIEYAHAMGNSVGNLQDYWDV 563
            VQYE A     TDI   MY S++ I+ Y  ++   RP I+ EY HAMGNS G +++YW+V
Sbjct: 507  VQYERAELNYNTDIYCRMYRSVDEIKAYVGKKDIYRPFILCEYLHAMGNSCGGMKEYWEV 566

Query: 564  IEAYPQLQGGFIWDWVDQALAFSNDLGQRYWAYGKDYHPD-MPTDGNFLNNGLVDPDRNP 622
             E  P  QGG IWDWVDQ     +  G+ YW YG DY P+ +P+ GNF  NGLV+  R P
Sbjct: 567  FENEPMAQGGCIWDWVDQNFREIDKDGKWYWTYGGDYGPEGIPSFGNFCGNGLVNAVREP 626

Query: 623  HPHLSEVKKVYQPIK--LRDFKVEGDKASVNLINGFDFASTSGLSLNWTLQ-KDGKIIAS 679
            HPHL EVKK+YQ IK  L D K       V + N +DF++ +   L W ++ +DG ++A 
Sbjct: 627  HPHLLEVKKIYQNIKATLSDRK----NLKVCIKNWYDFSNLNEYILRWNVKGEDGTVLAE 682

Query: 680  KRQAMPILSPGEQARVSLTLPGKQSLSAPFEYHLLLEVLVDTPRPLLPSDLRIAFEQFAL 739
              + +        A V +TL   +  +   E +L L        PL+ +D  +A++QF L
Sbjct: 683  GTKEVDC---EPHATVDVTLGAVKLPNTVREAYLNLSWSRKEATPLVDTDWEVAYDQFVL 739

Query: 740  PRFGTKAAYQVKKNQAKISEDSGSYRLTSGELSYEFDKRSGWLTQIYQEGEPQLKAPLMA 799
                   AY+ +K               +GE ++  DK +G L+ +  +G+  L AP+  
Sbjct: 740  AGNKNTTAYRPQK---------------AGETAFVVDKNTGALSSLTLDGKELLAAPITL 784

Query: 800  NFWRAPTDNDLGNQMPDWAGAWQDAATELEVTAIDADLALGLTISQTHAE----KGFSLR 855
            + +R  TDND  N+  + A  W+ A     +T     L    T +   AE    KG  + 
Sbjct: 785  SLFRPATDND--NRDRNGARLWRKAGLN-NLTQKVVSLKEEKTSATVRAEILNGKGQKVG 841

Query: 856  TR---YSLDNAGRLMVDSQFIPGNKPLADLPRFGFSTRLGFEHRYLSYFGRGPEETYADR 912
                 Y+LD  G L V + F P    +  + R G + R+   +  +SY GRG  ETY DR
Sbjct: 842  MADFVYALDKNGALKVRTTFQPDTAIVKSMARLGLTFRMADAYNQVSYLGRGDHETYIDR 901

Query: 913  QSGNPLGWYALPIEQTYHRYPRPQETGQRTQVRYAAVTDQRGQGWLAIANQAHAGEQDRK 972
                 +G Y   +E+ +H Y  PQ T  RT VR+A +TDQ G+G    +N+         
Sbjct: 902  NQSGRIGLYDTTVERMFHYYATPQSTANRTDVRWAKLTDQAGEGVFMESNR--------- 952

Query: 973  EADEVATLQTSLWPFAQADIDFRRGDAQDSASGLVAVTRNHGAEIPLREFVTWNIDYRQM 1032
                    Q S+ PF                S ++    +H  E+     +T ++D  Q 
Sbjct: 953  ------PFQFSIIPF----------------SDVLLEKAHHINELERDGMITIHLDAEQA 990

Query: 1033 GVGGDTSWGRPVHGPYRIKAEPIRFGFTLMPV 1064
            GVG  T  G  V   Y +  +   F FTL PV
Sbjct: 991  GVGTATC-GPGVLPQYLVPVKKQSFEFTLYPV 1021