Pairwise Alignments

Query, 333 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 316 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

 Score =  151 bits (381), Expect = 2e-41
 Identities = 91/312 (29%), Positives = 158/312 (50%), Gaps = 4/312 (1%)

Query: 22  VSVIVFNGFSPFHISVPSIVFG---RDTLNEAFFNLQFIAGEEGSIMSDIGMEIHARAKL 78
           V++++F  F    ++ P  VF    R   +   + L  I  E G++ +  G+ + A   +
Sbjct: 4   VAMVLFPDFLLLDMAGPMEVFSIANRYLDSADRYELSTIGTEPGALRASNGVNVQADLHI 63

Query: 79  DTL-EKADIIIVPYWRTVDERPNDQLIEALRLAHERGTLIVGLCLGGYVLAFAGLLDGKR 137
           D   E+ D+++VP         +  L+  L+ A  R      +C G +VL  AGLLDG R
Sbjct: 64  DQANERYDLLLVPGGPGAYNEKHPSLLAWLQGAVTRANRYGSICTGAFVLGHAGLLDGYR 123

Query: 138 AATHWELEQDFTQRFPETLLDTNALYVEDGGVITSAGTAAGIDCCLFVFRKYYSSAIANR 197
             THW   +   + FP+  ++T+ +YV+D  +ITS G  AGID  L V  + +   +A  
Sbjct: 124 VTTHWHYTERLIKGFPKATVETDQIYVQDRNLITSGGVTAGIDLALAVVAEDHGKKVAQD 183

Query: 198 IARRMVVPPYRDGGQAQFIEQPIPITTSDLRINELMERIRNDIGHKYTLDELAESVMMTR 257
           +A+ ++V   R GGQAQF      +   +  I  +   +   +   ++++ +A  V M+ 
Sbjct: 184 VAKVLLVVMKRQGGQAQFSPLMAAVAPHETPITRVQNHVLEHLDEAFSIERMASLVNMST 243

Query: 258 RTFTRKFHKATGMAFGEWLASERLNLAQELLESTDLTIEQIVTKTGFSSVFIFRDKFKGR 317
           R F R F +   M   E+L + R++ A+ LLES+D+ ++ +  K+GF SV   R  F  +
Sbjct: 244 RHFARVFAREVNMTPMEFLQNARIDCARNLLESSDVPLKTVAFKSGFGSVRHMRFLFSEK 303

Query: 318 YAVTPNRWRKTF 329
             +TP ++R+ F
Sbjct: 304 LGLTPTQYREQF 315