Pairwise Alignments

Query, 333 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 317 a.a., transcriptional regulator, AraC family with amidase-like domain protein from Pseudomonas syringae pv. syringae B728a

 Score =  213 bits (542), Expect = 5e-60
 Identities = 114/310 (36%), Positives = 176/310 (56%), Gaps = 3/310 (0%)

Query: 22  VSVIVFNGFSPFHISVPSIVFG--RDTLNEAFFNLQFIAGEEGSIMSDIGMEIHARAKLD 79
           V  +++N    F       VF   R  L  +++       +EG I +  G+ I       
Sbjct: 6   VVALIYNQLCTFEFGCTVEVFALKRPELGVSWYEFATFPVDEGPITAAGGITIVPTPGEV 65

Query: 80  TLEKADIIIVPYWRTVDERPNDQLIEALRLAHERGTLIVGLCLGGYVLAFAGLLDGKRAA 139
            LE AD IIVP WR V+     +LIE L+ AH RG  I  +C G +VLA AGLLDG +  
Sbjct: 66  LLENADTIIVPGWRGVESEVPQRLIEQLQAAHARGARICSICTGAFVLAAAGLLDGHKVT 125

Query: 140 THWELEQDFTQRFPETLLDTNALYVEDGGVITSAGTAAGIDCCLFVFRKYYSSAIANRIA 199
           THW         +P   +  N LYV+ G ++T+AG+AAG+D  L + R  + S +AN +A
Sbjct: 126 THWRYTDLLATMYPGLTIQPNELYVDQGSIVTAAGSAAGLDMMLHLVRNDHGSRVANMVA 185

Query: 200 RRMVVPPYRDGGQAQFIEQPIPITTSDLRINELMERIRNDIGHKYTLDELAESVMMTRRT 259
           +RMV+PP+R+GGQ+Q+  + + ++ SD  I+ LM+ IR+D+   +T+ E+A    ++ RT
Sbjct: 186 QRMVIPPHREGGQSQYASRQL-VSASDGPISNLMDWIRSDLQRPHTIKEMASRAALSTRT 244

Query: 260 FTRKFHKATGMAFGEWLASERLNLAQELLESTDLTIEQIVTKTGFSSVFIFRDKFKGRYA 319
             R F ++TG+   +WL  ER+  A+ELLES+ L + ++V + GF S   FR  F+    
Sbjct: 245 LHRSFMESTGLTPYDWLLGERIAYAKELLESSKLRLNEVVDRAGFGSEESFRRHFRNLVG 304

Query: 320 VTPNRWRKTF 329
           ++P+ +RK F
Sbjct: 305 ISPSSYRKQF 314