Pairwise Alignments

Query, 333 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 320 a.a., helix-turn-helix domain-containing protein from Dyella japonica UNC79MFTsu3.2

 Score =  278 bits (711), Expect = 1e-79
 Identities = 144/313 (46%), Positives = 195/313 (62%), Gaps = 1/313 (0%)

Query: 22  VSVIVFNGFSPFHISVPSIVFGRDTLNEAF-FNLQFIAGEEGSIMSDIGMEIHARAKLDT 80
           ++V+ FN   PFH+SVP  VF     +E   F L+  + E   + S  G  I     LD 
Sbjct: 6   IAVVAFNDILPFHLSVPCGVFAAVLRDEQSPFRLRVCSAEGRRVRSASGFMIATDYGLDE 65

Query: 81  LEKADIIIVPYWRTVDERPNDQLIEALRLAHERGTLIVGLCLGGYVLAFAGLLDGKRAAT 140
           L  ADI+IVP WR+ +ERP + L+EALR A  RG  IVGLC+G +VL  AGLLDG+RA T
Sbjct: 66  LRNADIVIVPSWRSAEERPPEPLLEALRRAAARGKRIVGLCMGAFVLGHAGLLDGRRATT 125

Query: 141 HWELEQDFTQRFPETLLDTNALYVEDGGVITSAGTAAGIDCCLFVFRKYYSSAIANRIAR 200
           HW    +    FP   +D + LYV+ G V+TSAG AAGIDCCL + R+   S  ANRIAR
Sbjct: 126 HWFATDELAACFPTAEVDPDVLYVDAGQVVTSAGAAAGIDCCLHLVRQLLGSEAANRIAR 185

Query: 201 RMVVPPYRDGGQAQFIEQPIPITTSDLRINELMERIRNDIGHKYTLDELAESVMMTRRTF 260
           RMVV P+R GGQAQFIEQP+P    D R+ +L++ +R  +     LDE+A    M+RR+F
Sbjct: 186 RMVVSPFRHGGQAQFIEQPVPSMAGDERMAKLLDEVRRKLHQPQNLDEIAVRAAMSRRSF 245

Query: 261 TRKFHKATGMAFGEWLASERLNLAQELLESTDLTIEQIVTKTGFSSVFIFRDKFKGRYAV 320
           TR F + TG +FG+WL ++RL+ AQ LLE+T L +++I +  G  S    R  F+  +  
Sbjct: 246 TRHFRQLTGSSFGDWLMAQRLSEAQRLLETTGLPLDRIASAVGLGSPVTLRQHFQRAFRT 305

Query: 321 TPNRWRKTFHEQK 333
           +P  +R+TF+  K
Sbjct: 306 SPANYRRTFNAGK 318