Pairwise Alignments

Query, 333 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 328 a.a., helix-turn-helix domain-containing protein from Ralstonia sp. UNC404CL21Col

 Score =  260 bits (665), Expect = 3e-74
 Identities = 133/319 (41%), Positives = 193/319 (60%), Gaps = 6/319 (1%)

Query: 17  QHVPNVSVIVFNGFSPFHISVPSIVF-GRDTLNEAFFNLQFIAGE---EGSIMSDIGMEI 72
           QH   ++V+ FN  SPFH+SVP +VF  R       ++L+  A E   +G + +  G  +
Sbjct: 7   QHPQQIAVLAFNDISPFHLSVPCLVFEDRVWAGLPSYHLRICADEPARKGGLRTTAGFAV 66

Query: 73  HARAKLDTLEKADIIIVPYWRTVDERPNDQLIEALRLAHERGTLIVGLCLGGYVLAFAGL 132
                L+   +AD++IVP WR  DERP   ++ A+  A+ RG  +VGLCLG +VLA AG+
Sbjct: 67  QTEFTLEDAARADVLIVPSWRDTDERPPAAMVNAVGDAYARGATVVGLCLGAFVLAEAGV 126

Query: 133 LDGKRAATHWELEQDFTQRFPETLLDTNALYVE--DGGVITSAGTAAGIDCCLFVFRKYY 190
           LDG  A THW     F+QR+P   L  + LY++  DG ++TSAGTAAG+DCCL + R+++
Sbjct: 127 LDGHEATTHWSAADAFSQRYPRVKLVPDVLYLDAADGRLVTSAGTAAGLDCCLHLVRRWH 186

Query: 191 SSAIANRIARRMVVPPYRDGGQAQFIEQPIPITTSDLRINELMERIRNDIGHKYTLDELA 250
            + +ANRIARR+VV P+R GGQAQ+IEQP+       R+++L+     ++   ++LD LA
Sbjct: 187 GAEVANRIARRLVVAPHRQGGQAQYIEQPLHDAPGGDRLSDLLNWTVANLAEPHSLDSLA 246

Query: 251 ESVMMTRRTFTRKFHKATGMAFGEWLASERLNLAQELLESTDLTIEQIVTKTGFSSVFIF 310
           E   M+RR FTR+F + TG   G+WL  +RL  AQ +LE+T   +E I    GF S    
Sbjct: 247 ERAAMSRRNFTRRFRELTGTTVGQWLLGQRLAYAQRMLETTRQPVEAIAQLAGFGSAVSL 306

Query: 311 RDKFKGRYAVTPNRWRKTF 329
           R  F   Y  +P+ +R  F
Sbjct: 307 RQHFSRTYHTSPSAYRALF 325