Pairwise Alignments

Query, 333 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 320 a.a., transcriptional regulator, AraC family with amidase-like domain from Paraburkholderia bryophila 376MFSha3.1

 Score =  136 bits (343), Expect = 6e-37
 Identities = 95/321 (29%), Positives = 158/321 (49%), Gaps = 14/321 (4%)

Query: 19  VPNVSVIVFNGFSPFHISVPSIVFG---RDTLNEAFFNLQFIAGEEGSIMSDIGMEIHAR 75
           +P V++ +F G     ++ P  VF    R    E  + +  ++ ++  + +  GM + A 
Sbjct: 1   MPTVAIAIFPGVQALDVAGPVDVFSEANRFVTPEERYEVTLLSAKQAPLRASNGMTLIAD 60

Query: 76  AKLD-TLEKADIIIVPYWRTVDER--PNDQLIEALRLAHERGTLIVGLCLGGYVLAFAGL 132
           A  D   E  D+ +V     + E   P   L++ L     R      +C G + L  AGL
Sbjct: 61  ATFDHAREPFDLALVAGGPALPEGEPPAAPLLDWLTDVAPRCARYGSICTGAFALGHAGL 120

Query: 133 LDGKRAATHWELEQDFTQRFPETLLDTNALYVEDGGVITSAGTAAGIDCCLFVFRKYYSS 192
           LD +   THW+       +FP+  +D + +Y+ DG ++TSAG  AGID  L +  + + S
Sbjct: 121 LDARNVTTHWQHAAQLATQFPKARVDYDRIYLRDGQLVTSAGVTAGIDLSLALVAEDHGS 180

Query: 193 AIANRIARRMVVPPYRDGGQAQF---IEQPIPITTSDLRIN-ELMERIRNDIGHKYTLDE 248
            IA  +A+R+VV   R GGQ+QF   +  P   T+   ++   +MERI       +T+ E
Sbjct: 181 HIALAVAKRLVVFAQRQGGQSQFSPYLTAPADETSPVAKVQAHVMERIHEG----FTVKE 236

Query: 249 LAESVMMTRRTFTRKFHKATGMAFGEWLASERLNLAQELLESTDLTIEQIVTKTGFSSVF 308
           LA+   M+ R F R F + TG+   E++   R++ A++LLES+   ++ I    GF +  
Sbjct: 237 LADVAGMSARNFARVFVQETGVTPHEFVERARVDAARKLLESSGAALKTIAYDCGFGTAE 296

Query: 309 IFRDKFKGRYAVTPNRWRKTF 329
             R  F  R   TP ++R+ F
Sbjct: 297 RMRIVFMKRIGATPMQYRERF 317