Pairwise Alignments

Query, 313 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 310 a.a., ABC transporter from Pseudomonas fluorescens FW300-N2C3

 Score =  399 bits (1025), Expect = e-116
 Identities = 203/300 (67%), Positives = 239/300 (79%)

Query: 7   ALVIDSLRKTYKGGVEAVKGISLKVEAGDFFALLGPNGAGKSTTIGVICSLVQKSSGKVK 66
           AL I  L KTY  G +A+ GI L V  GDFFALLGPNGAGKSTTIG++ +LV K+SG V 
Sbjct: 4   ALSIRQLTKTYGNGFQALSGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGTVN 63

Query: 67  VFEHDIDTQLELAKMSIGLVPQEFNFNQFETVQQIVVNQAGYFGVSREVAFERAKKYLSQ 126
           VF HD+D +    K  IG+VPQEFNFNQFE    IVV QAGY+G+  ++A ERA++YL+Q
Sbjct: 64  VFGHDLDREPAALKRCIGVVPQEFNFNQFEKTFDIVVTQAGYYGIPPKIANERAEQYLTQ 123

Query: 127 LDLWDKRNSPSRALSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLTDLN 186
           L LWDKR+ PSR+LSGGMKRRLMIARAL+HEP+LLILDEPTAGVDIELRRSMW+FLT+LN
Sbjct: 124 LGLWDKRDVPSRSLSGGMKRRLMIARALVHEPRLLILDEPTAGVDIELRRSMWSFLTELN 183

Query: 187 RQGVTIILTTHYLEEAEMLCRNIGIIDKGELVECTSMKSLLSRLNMETFVFDLKADINEA 246
           ++G+TIILTTHYLEEAE LCRNIGIID G +VE TSM+ LLS+L++ETF+ DLK D+  A
Sbjct: 184 QKGITIILTTHYLEEAEQLCRNIGIIDHGTIVENTSMRQLLSQLHVETFLLDLKHDLKTA 243

Query: 247 PTLEGISCRLTDPHTLEVDVEKAHSINSVFAQLTEQGIEVLSMRNKANRLEELFVELVEQ 306
           P L G   RL D HTLEV V+KA  I  +F QL  Q IEVLS+RNK NRLEELFV LVE+
Sbjct: 244 PQLVGYPARLVDSHTLEVQVDKAVGITGLFTQLALQNIEVLSLRNKTNRLEELFVSLVEK 303