Pairwise Alignments

Query, 313 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 307 a.a., ABC-type multidrug transport system, ATPase component from Pseudomonas stutzeri RCH2

 Score =  231 bits (589), Expect = 2e-65
 Identities = 133/302 (44%), Positives = 176/302 (58%), Gaps = 7/302 (2%)

Query: 8   LVIDSLRKTYKGGVEAVKGISLKVEAGDFFALLGPNGAGKSTTIGVICSLVQKSSGKVKV 67
           + I+ L KTY  G  A+K I L +  G+ FALLGPNGAGK+T I +IC +V   SG+V V
Sbjct: 5   IAIEQLTKTYASGHPALKRIDLDIRKGEIFALLGPNGAGKTTLISIICGIVNPGSGRVLV 64

Query: 68  FEHDIDTQLELAKMSIGLVPQEFNFNQFETVQQIVVNQAGYFGVSREVAFERAKKYLSQL 127
             HDI      A+  IGLVPQE     FE+V   V    G FG + + +F   +K L  L
Sbjct: 65  DGHDIVEDYRAARSKIGLVPQELFNEGFESVWATVRFSRGLFGKAPDDSF--LEKLLRDL 122

Query: 128 DLWDKRNSPSRALSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLTDLNR 187
            LWDKRN+    LSGGMKRR+MIA+AL HEP +L LDEPTAGVD+ELRR MW  +  L  
Sbjct: 123 SLWDKRNARILELSGGMKRRVMIAKALSHEPSILFLDEPTAGVDVELRRDMWEMVRGLRE 182

Query: 188 QGVTIILTTHYLEEAEMLCRNIGIIDKGELVECTSMKSLLSRLNMETFVFDLKADINEAP 247
           +GVTIILTTHY+EEAE +   IG+I +GE++       L+ +L  +     L+  + E P
Sbjct: 183 RGVTIILTTHYIEEAEEMADRIGVISRGEIILVEDKDVLMRKLGKKQLTLHLQRPLAEIP 242

Query: 248 T-LEGISCRLTDP-HTLEVDVEKAH---SINSVFAQLTEQGIEVLSMRNKANRLEELFVE 302
             L      LTD  + L    +  H    I  +  +L   GI+   +++  + LEE+FV 
Sbjct: 243 AELASYPLELTDAGNQLVFTFDAQHEDTGIAELLKRLAAHGIDFKDLQSSQSSLEEIFVN 302

Query: 303 LV 304
           LV
Sbjct: 303 LV 304