Pairwise Alignments

Query, 313 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 310 a.a., ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  218 bits (555), Expect = 1e-61
 Identities = 123/305 (40%), Positives = 185/305 (60%), Gaps = 8/305 (2%)

Query: 7   ALVIDSLRKTYKG-----GVEAVKGISLKVEAGDFFALLGPNGAGKSTTIGVICSLVQKS 61
           A+ I+ L+KTYKG       +A+KG+ L +  G  F LLGPNGAGKST I ++  LV K+
Sbjct: 5   AIRIEGLQKTYKGRRGQPAKDALKGVDLSIPRGSVFGLLGPNGAGKSTMINILAGLVLKT 64

Query: 62  SGKVKVFEHDIDTQLELAKMSIGLVPQEFNFNQFETVQQIVVNQAGYFGVSREVAFERAK 121
           +GKV ++  D D     ++ SIG++PQE N + F + +  +  QAG +GV +  A  R+ 
Sbjct: 65  AGKVTIWGFDQDENPRQSRASIGVMPQELNLDPFFSPRGALEVQAGLYGVPK--AERRSD 122

Query: 122 KYLSQLDLWDKRNSPSRALSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTF 181
             L  + L DK ++ +R LSGGM+RRL++ +AL+H P +L+LDEPTAGVDIELR+ +W  
Sbjct: 123 DILRMVGLEDKAHAYARTLSGGMQRRLLLGKALVHHPNILVLDEPTAGVDIELRQMLWEN 182

Query: 182 LTDLNRQGVTIILTTHYLEEAEMLCRNIGIIDKGELVECTSMKSLLSRLNMETFVFDLKA 241
           +  LN QG+TIILTTHYLEEAE +C  I II++GELV   +  +LL RL+ +  V     
Sbjct: 183 IRKLNAQGMTIILTTHYLEEAEEMCDEIAIINQGELVARDTTANLLGRLDAKAMVVHPAH 242

Query: 242 DINEAPTLEGISCRLTDPHTLEVDVEKAHS-INSVFAQLTEQGIEVLSMRNKANRLEELF 300
            +   P  +GI+  L     + +      +    V + + E GI +  ++ +   LE++F
Sbjct: 243 PVTALPVGDGIASELRGDGVVILRYHGNRTRAEEVLSAVREAGISIRDVKTEEADLEDVF 302

Query: 301 VELVE 305
           + L +
Sbjct: 303 LALTK 307