Pairwise Alignments

Query, 264 a.a., 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) from Shewanella loihica PV-4

Subject, 307 a.a., 3-methyl-2-oxobutanoate hydroxymethyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  236 bits (602), Expect = 4e-67
 Identities = 125/262 (47%), Positives = 168/262 (64%), Gaps = 3/262 (1%)

Query: 4   ITSSTLLKFKQEGKKFTALTAYDASFAGAFDSEGIDVLLVGDSLGMVLQGHDDTLPVTVE 63
           +T++ + K K   ++   LTAYD + A   D  G D++LVGDSLGMV+ G +DTL VT++
Sbjct: 21  LTTADIRKAKGR-QRLAMLTAYDYTSARIVDGAGADLILVGDSLGMVMLGREDTLSVTLD 79

Query: 64  DIVYHTRCVRRGIKRSLLIADMPFMSYATP--EQAMTNATALMQAGANMVKLEGGHWLLE 121
           ++++H R V RG + ++++ADMPFM+Y T   +  +  A    ++G   VKLEG   +L 
Sbjct: 80  EMLHHCRAVVRGTRHAMVVADMPFMTYETGVRDALLNGARLFRESGVRAVKLEGAGPVLP 139

Query: 122 TVTKLTERGIPVCAHLGLTPQSVHVFGGFKVQGRDADNAQRIIDEAKAIEAAGAQLLVLE 181
            V  L + GIPV  HLGLTPQ V   GGFKVQGR A+ A R+ D+A A++ AG   LVLE
Sbjct: 140 QVRALVDAGIPVMGHLGLTPQRVAEMGGFKVQGRQAEAALRLFDDALALQEAGCFSLVLE 199

Query: 182 CIPAALAKSITEALTIPVIGIGAGADTDGQILVMHDVLGISSGYIPRFSKNYLAQTGEIR 241
           C+PA +A+ +T  L IP IGIGAGA  DGQ+LV+HD+LG+     PRF K Y    G   
Sbjct: 200 CVPAPVAEQVTARLHIPTIGIGAGAGCDGQVLVLHDMLGLYGELSPRFVKRYADLAGMAG 259

Query: 242 SAIRAYIEEVDTGVFPAAEHTF 263
            A+  Y  EV  G FPAAEHTF
Sbjct: 260 EAVARYAHEVREGSFPAAEHTF 281