Pairwise Alignments

Query, 176 a.a., 2'-5' RNA ligase (RefSeq) from Shewanella loihica PV-4

Subject, 195 a.a., 2'-5' RNA ligase from Sinorhizobium meliloti 1021

 Score = 50.1 bits (118), Expect = 2e-11
 Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 6/130 (4%)

Query: 1   MKRLFLAIAPDAAQLEQLTQLQASLDGEGRLVPRDNLHMTLAFLGQCSEAQQEALSESLA 60
           M RLF A+         L+ L+  L G  R +  +N H+TL F+G       + + + L 
Sbjct: 1   MPRLFTALEIPRNAAMSLSLLRGGLPG-ARWIDVENYHITLRFIGDVDWRTADEIIDRLD 59

Query: 61  RLAHQRRLPTFEVTLN-TLEHWVKPKILCLKGAARDPGLISLFNQCQRLAQQLGLHTSEH 119
           R+      P F++ L+ T     K       G +  P + +L  + +R+ Q++GL +   
Sbjct: 60  RIER----PEFQLQLSGTGAFGSKKPHSVWAGVSIAPEMFALQAEIERICQRIGLPSDPR 115

Query: 120 SFTPHITLMR 129
            FTPH+TL R
Sbjct: 116 KFTPHVTLAR 125