Pairwise Alignments

Query, 789 a.a., penicillin-binding protein 1B (RefSeq) from Shewanella loihica PV-4

Subject, 738 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  580 bits (1494), Expect = e-169
 Identities = 305/712 (42%), Positives = 439/712 (61%), Gaps = 4/712 (0%)

Query: 64  YSIYLDQIIARKFEGQKWHLPAQVFSRSMALYPGAAVSHDQLIAELKLLGYRKVANPRQV 123
           +++YLD ++  KF G++W +PA+V++R + L+ G  +S D  + EL  LGYR+ +     
Sbjct: 5   FAVYLDAVVQEKFSGKRWTIPAKVYARPLELFVGQKLSKDDFLTELDALGYRRESVANGP 64

Query: 124 GEFSASKTKVDLWRRPFLHPQGSQEAQRMMISFDSQGVASVARSSDHRELAVFHLEPVLL 183
           G  S +   +DL  R F   +G ++AQ + + F    VA++   +++  L+V  LEP+L+
Sbjct: 65  GAASVNGNTIDLNTRGFQFYEGMEQAQPVRVRFSGDYVAALT-GANNASLSVVRLEPLLI 123

Query: 184 DRMITGDGEDRLFVATDKIPKAIVDALILVEDRSFYEHHGVNPFAIIRAAMVNISAGRTV 243
             +   + EDR+ +  D++P  ++D LI VEDR FY H GV+P +I RA  VN S+G   
Sbjct: 124 GGLYPKNLEDRILIKIDQVPPFLLDTLIAVEDRDFYHHFGVSPKSIARAVWVNTSSGHMR 183

Query: 244 QGGSTLTQQLAKNFFLSSERSIIRKLREALMAIIIDFRYDKDEILEAYLNEVYMGQDKSR 303
           QGGSTLTQQL KNF+L++ERS+ RKL EA+MA++++  YDK EILEAYLNEV++GQD  R
Sbjct: 184 QGGSTLTQQLVKNFYLTNERSLTRKLTEAMMALLLELHYDKQEILEAYLNEVFIGQDGQR 243

Query: 304 AVHGMGLASQFYFGRPIAELTLPQQAFLVAAIKGPSYYNPWRFPERAQERRDLVLRLLME 363
           AVHG GLASQF+F +P++EL L Q A LV  +KGPS YNP R PERA ERR+LVL LL +
Sbjct: 244 AVHGFGLASQFFFSQPLSELKLHQVALLVGMVKGPSSYNPRRNPERALERRNLVLDLLQQ 303

Query: 364 SGQLPVAQYKAAVESPLGVRKASKPVHQKLPAFFAVVRGELSRRFGDSLLQQSGIKVYTT 423
            G     Q +AA + PLGV K         P F  +V+ +L   + D  L + G++++T+
Sbjct: 304 QGVATAEQVEAAKKMPLGVTKRGSLADSSFPGFMDLVKRQLREDYRDEDLTEEGLRIFTS 363

Query: 424 LDPLAQEAAEQAVRSTMKNLEQRDKA--LQVGMVVTDKYSAGIAAMVGDKVPSYQGFNRA 481
            DP+ Q  AE +V  T K L  R  A  ++  MVVT+  +  + AM+G +  S+ GFNRA
Sbjct: 364 FDPILQMKAEASVEDTFKRLGGRKGADEVEAAMVVTNPETGEVQAMIGSRQASFAGFNRA 423

Query: 482 VEIRRPIGSLIKPFVYATALTHGDKYTLATPLKDEPITLTNSQGKTWSPQNVNKQFSGEV 541
           ++  RPIGSLIKP VY TAL    +YTL + L DE  ++  + G+ W PQN +++  G V
Sbjct: 424 LDAVRPIGSLIKPAVYLTALEKPSQYTLTSWLSDETFSVKGADGQVWKPQNYDRRSHGTV 483

Query: 542 PLMTAFKKSMNVPTVNLGMAIGTDAVATTLAKSGWDETIPEYPSMLLGAVNGSPLMVAQV 601
            L      S N+ T  LG+ +G   V  TLA+ G    +P +PSMLLGA   +P+ VA +
Sbjct: 484 FLYQGLAHSYNLSTARLGLEVGVPNVLKTLARLGVSRELPAFPSMLLGAGGLTPIEVAAM 543

Query: 602 YQTLADNGRYRQLNAVTHVLDADNQPLSASQRGADQAISVASDFLVQHAMTQVVQSGTAT 661
           YQTLA+ G    +  +  VL AD +PL        Q    AS +L+Q AM +V++ GT +
Sbjct: 544 YQTLANGGFNTPMRGIRSVLTADGEPLKRYPFQIQQRFDPASIYLIQSAMQRVMREGTGS 603

Query: 662 KLGQAFP-GVTLAGKTGTSNDSRDSWFAGFDERNVAAVWVGLDDNGKTSLYGSSGAMAVY 720
            +    P  +TLAGKTGTSNDSRDSWFAGF +  +A VW+G DDNGKT   G++GA+ V+
Sbjct: 604 SVYNVLPRTLTLAGKTGTSNDSRDSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVW 663

Query: 721 QAFLKQRAPISLRRTPVNGVVSGYFDAKTGVAKQGNCGNVVAVPALAESYRP 772
            +F+++  P+ L     + +V  + D++TG     NC   V +P +  S  P
Sbjct: 664 TSFMRKADPLPLDMPQPDNIVQAWVDSRTGQGSDANCPGAVQMPYIRGSEPP 715