Pairwise Alignments

Query, 789 a.a., penicillin-binding protein 1B (RefSeq) from Shewanella loihica PV-4

Subject, 774 a.a., penicillin-binding protein 1B from Pseudomonas fluorescens FW300-N2E3

 Score =  587 bits (1512), Expect = e-171
 Identities = 314/749 (41%), Positives = 456/749 (60%), Gaps = 7/749 (0%)

Query: 29  KSASKSTATARPGWGRRIWSLSW--KLGLILFAAMTIYSIYLDQIIARKFEGQKWHLPAQ 86
           ++ S  T    P  G R W L W  KL L+    +  +++YLD ++  KF G++W +PA+
Sbjct: 3   RTRSPRTPKKPPSRGLRPW-LGWALKLSLVGLVVLAGFAVYLDAVVQEKFSGKRWTIPAK 61

Query: 87  VFSRSMALYPGAAVSHDQLIAELKLLGYRKVANPRQVGEFSASKTKVDLWRRPFLHPQGS 146
           V++R + L+ G  +S D  + EL  LGYR+ +     G  S +   VDL  R F   +G 
Sbjct: 62  VYARPLELFVGQKLSKDDFLTELDALGYRRESVANGPGAASVNGNTVDLNTRGFQFYEGL 121

Query: 147 QEAQRMMISFDSQGVASVARSSDHRELAVFHLEPVLLDRMITGDGEDRLFVATDKIPKAI 206
           ++AQ + + F    VA ++ S++  +L+V  LEP+L+  +   + EDR+ +  D++P  +
Sbjct: 122 EQAQPVRVRFSGDYVAELS-STNGSKLSVVRLEPLLIGGLYPKNLEDRILIKIDQVPPYL 180

Query: 207 VDALILVEDRSFYEHHGVNPFAIIRAAMVNISAGRTVQGGSTLTQQLAKNFFLSSERSII 266
           +D L+ VEDR FY H GV+P +I+RA  VN SAG+  QGGSTLTQQL KNF+L++ERS+ 
Sbjct: 181 LDTLVAVEDRDFYHHFGVSPKSIMRAVWVNTSAGQMRQGGSTLTQQLVKNFYLTNERSLS 240

Query: 267 RKLREALMAIIIDFRYDKDEILEAYLNEVYMGQDKSRAVHGMGLASQFYFGRPIAELTLP 326
           RKL EA+MA++++  Y K +ILEAYLNEV++GQD  RAVHG GLASQF+F +P++EL L 
Sbjct: 241 RKLTEAMMAMLLELHYKKPDILEAYLNEVFIGQDGQRAVHGFGLASQFFFSQPLSELKLH 300

Query: 327 QQAFLVAAIKGPSYYNPWRFPERAQERRDLVLRLLMESGQLPVAQYKAAVESPLGVRKAS 386
           Q A LV  +KGPSYYNP R+PERA ERR+LVL LL + G     Q  AA + PLGV K  
Sbjct: 301 QVALLVGMVKGPSYYNPRRYPERALERRNLVLDLLEQQGVATAEQVAAAKKMPLGVTKRG 360

Query: 387 KPVHQKLPAFFAVVRGELSRRFGDSLLQQSGIKVYTTLDPLAQEAAEQAVRSTMKNLEQR 446
                  P F  +V+ +L   + D  L + G++++T+ DP+ Q  AE +V  T K L  R
Sbjct: 361 SLADSSFPGFLDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKRLAGR 420

Query: 447 DKA--LQVGMVVTDKYSAGIAAMVGDKVPSYQGFNRAVEIRRPIGSLIKPFVYATALTHG 504
             +  ++  MVVT+  +  + AM+G +  S+ GFNRA++  RPIGSLIKP VY TAL   
Sbjct: 421 KGSDDVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLIKPAVYLTALEKP 480

Query: 505 DKYTLATPLKDEPITLTNSQGKTWSPQNVNKQFSGEVPLMTAFKKSMNVPTVNLGMAIGT 564
            +YTL + L DE  ++  + G+ W PQN +++  G V L      S N+ T  LG+ +G 
Sbjct: 481 SQYTLTSWLSDESFSVKGADGQVWKPQNYDRRSHGTVFLYQGLAHSYNLSTARLGLEVGV 540

Query: 565 DAVATTLAKSGWDETIPEYPSMLLGAVNGSPLMVAQVYQTLADNGRYRQLNAVTHVLDAD 624
             V  TL + G     P +PSMLLGA   +P+ VA +YQTLA+ G    +  +  VL A+
Sbjct: 541 PNVLKTLGRLGITREFPAFPSMLLGAGGMTPIEVATMYQTLANGGFNTPMRGIRSVLTAE 600

Query: 625 NQPLSASQRGADQAISVASDFLVQHAMTQVVQSGTATKLGQAFP-GVTLAGKTGTSNDSR 683
            QPL        Q    AS +L+Q AM +V++ GT + +    P  +TLAGKTGTSNDSR
Sbjct: 601 GQPLKRYPFQIQQRFDPASIYLIQSAMQRVMREGTGSSVYNVLPKTLTLAGKTGTSNDSR 660

Query: 684 DSWFAGFDERNVAAVWVGLDDNGKTSLYGSSGAMAVYQAFLKQRAPISLRRTPVNGVVSG 743
           DSWFAGF +  +A VW+G DDNGKT   G++GA+ V+ +F+++  P+ L     + +V  
Sbjct: 661 DSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLDMPQPDNIVQA 720

Query: 744 YFDAKTGVAKQGNCGNVVAVPALAESYRP 772
           + D++TG   + +C   V +P +  S  P
Sbjct: 721 WVDSRTGQGSEASCPGAVQMPYIRGSEPP 749